Sorghum bicolor (sorghum): 8082158 Help Entry 8082158           CDS       T01086                                  Name (RefSeq) probable RNA helicase SDE3   KO K18422   helicase MOV-10 [EC:5.6.2.5] Organism sbi  Sorghum bicolor (sorghum) Brite KEGG Orthology (KO) [BR:sbi00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sbi03019]     8082158    03036 Chromosome and associated proteins [BR:sbi03036]     8082158 Enzymes [BR:sbi01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.5  RNA 5'-3' helicase      8082158 Messenger RNA biogenesis [BR:sbi03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      8082158 Chromosome and associated proteins [BR:sbi03036]  Eukaryotic type   Gene silencing    microRNA pathway     Other miRNA pathway proteins      8082158 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_12 AAA_11 MOV-10_beta-barrel AAA_30 AAA_19 UvrD-helicase ResIII AAA_22 PhoH Terminase_6N AAA Terminase_3 UvrD_C_2 Helicase_RecD Mov-10_helical AAA_16 AAA_7 ATPase_2 Med6 SLFN-g3_helicase Mg_chelatase LTD Motif Other DBs NCBI-GeneID:  8082158 NCBI-ProteinID:  XP_002465826 UniProt:  C5WWZ2 LinkDB All DBs Position 1:76718166..76722949 Genome browser AA seq 968 aa AA seqDB search MGTHRRNYSDDEFSVAGEKPEVEFMDFQNDDTFQDYSSEDAPVLVSVPFPFEDGKPKSVL IGETSADTIQIENTSHESVNLWSVRIFSSNPEDSYVLSMMRPPSNDAHEEEKQAFLALTS VEDRTLLPGQTLTVWLSCTPKDIGLHTTIVHVDIGDEKIERVAFILADDNVSKALYSDKP YSRRRDQVKRFEPSPFVPGCRPIQQHTQGFKHKLRQYAIPAHIRELIESKQKPDVLYNEL SMMNYAEYFSALIVMEELNLEEEMRTYDMEGVLMRRRGMNFLSLEVPGLAERRPSLVQGD FIVARYAGNDARPYQGFIHKVEADEIFLQFDHQFHMNHRDRNKYHVSFTYNRVSMRRLYK AIDDAKHLGPGVLFPRRSPYRVLKRWPFKPLNPHINTEQAGAVEMILACRGVPPYVIFGP PGTGKTMTIVEAILQLYTGKKRSNILICAASNTAADHVLEKLLEASYPIRPSDIFRLNAQ SRQYEDVNTDFIKFCFFQDQVFKCPPLKALVQYRIVISTYSSSYLLQAEGICQGHFTHIF LDEAGQASEPEVMVPLSGLCGRDTVVVLAGDPKQLGPVVYCKQAENDGLGRSYLERLLTD FEQYQTGNPNYVTKLVKNYRCHPAILDLPSELFYEGELIPCKEGESSAYDCIGLPNKSFP VLFVGIQGCDEREGTNPSWFNRIEVSKVVSIIRNLTRGGDVHESDIGVITPYRQQVTKIK KALEAFEMPDLKVGSVEQFQGQEREVIIISTVRSTVKHNEFDKFFNLGFLSNHKRFNVGI TRAKSLLIIIGNPYIITKDRHWDRLLRYCADHDSYQGCPLPPPESHSYSDDTRFFSKYDE DQGGPSGQDYNQEAGYCNYNQEPAYCKYNQEPSDFGLRHDTRVQPASENQELWSEEFLED ENQPFSKPQADLEEMTKQDVEEGAAQGDVQADQLSTNDNQLQDTYTEKYTFPPGWCDVSS IPATGWGD NT seq 2907 nt NT seq  +upstreamnt  +downstreamnt atggggactcatcgtaggaattattcagacgatgaattttcagttgctggtgagaagcca gaagtagagttcatggatttccagaatgacgacacttttcaggattattcatctgaagat gcccctgtgcttgtttcagttcctttcccttttgaggatggaaaaccaaaatctgtactt attggagaaacatcagccgataccattcaaattgagaatacctctcatgaatctgtaaat ttgtggagtgtaagaattttctcttcaaacccagaagacagctatgtgttatcaatgatg agaccaccatcaaatgatgctcatgaggaggaaaagcaggcttttcttgctttgacatct gtcgaagaccgtacactgctgcctggacagacccttacagtttggttgtcttgtacgcca aaagatattggtttgcatacaacaatcgtgcatgttgatatcggtgatgagaagattgag cgtgtggcttttattttggcagatgacaatgtctccaaggccttatattctgataagcct tattccaggagacgtgatcaagttaagagatttgagccttcaccatttgtgccaggttgc cgtccaattcagcagcacactcaaggattcaaacataagcttcgtcagtatgcaatacct gcacatatccgtgagctcattgaaagtaaacagaaacctgatgtcctatataatgagttg agcatgatgaactatgcggaatattttagcgctcttatagtcatggaagaactcaacttg gaggaggagatgagaacttatgacatggagggtgtcttaatgagacggaggggtatgaac tttttgtctcttgaggtccctggtttggcagaaagaaggccatcactagtccaaggagac ttcatagttgctagatatgctgggaatgatgctcggccttaccaaggtttcattcataag gttgaagcagatgagatatttttacaatttgaccatcagttccacatgaatcaccgtgac agaaacaagtaccacgtcagcttcacttataacagagtgagcatgagaaggctttacaaa gctattgatgatgcaaaacatttgggacctggcgttttgtttccccgccgatcaccttat agagttttgaaaaggtggccatttaagcctctgaatccacatataaatactgagcaagct ggtgctgttgaaatgatacttgcctgccgaggagttccaccatatgtgatatttggacct ccaggaactggcaagacaatgaccattgtagaggccattttgcagctttatacgggcaag aaaaggtcaaatattctcatttgtgctgcttccaatactgcagctgatcatgtactggag aaactccttgaagctagctatccgatccgtccaagtgatatctttaggctaaatgctcag agccgtcaatacgaggatgtcaatactgattttatcaagttttgcttctttcaagatcag gtgttcaagtgccctccgttaaaagcattggtgcagtacagaatagttatatcgacctat tcgagttcatatctgctgcaggctgagggcatttgccaagggcatttcacacacattttc ttggatgaggctggtcaagcctctgaaccagaggtgatggttcctttgtcaggattgtgt ggaagagacactgtggttgtgttagcaggagatccaaaacaattagggccagtggtttat tgtaagcaagcggagaacgatggtctggggagatcatatttggaaaggctgcttactgac ttcgagcagtaccaaacagggaatcctaattatgtgaccaagctggtgaagaattatcgg tgccatcctgcaatcctagatctaccatcagagcttttctatgagggtgaattgattccc tgtaaagaaggagaatcatctgcttatgattgcattggccttcctaacaagtccttccct gttctttttgtcggaattcaaggatgcgatgagagggagggcaccaatccatcatggttc aacaggattgaagttagtaaagtagtatctatcatcaggaacctgacaaggggtggggat gttcatgaatctgatataggagtaatcactccatatcgtcagcaagttaccaagataaag aaagccctagaggcatttgaaatgcccgacttgaaagtcggaagcgtcgaacaattccag ggccaagagagggaagtgataatcatctctacagtcaggtcgaccgtaaagcataacgag tttgacaaattttttaacctgggattcttgagcaaccacaaaaggttcaatgttggtatc actcgcgcaaaatcattgctcatcattattggaaacccttacattatcaccaaggaccgt cactgggataggctcctgcgatactgtgctgaccatgactcttatcaagggtgccccctt ccaccaccagaatctcattcttattcagacgataccagattcttctccaagtatgacgaa gaccaaggtggaccttctgggcaggactacaaccaagaagctggctactgcaactacaac caagaacctgcctactgcaagtacaaccaagaaccgtctgacttcggtctgaggcatgac actcgtgttcaacctgcttcggagaatcaagagttatggtctgaggagtttctggaagat gagaaccagccattcagcaaaccccaagcagatcttgaggagatgacgaagcaggatgtc gaggaaggggctgcacagggagatgtgcaggctgaccagttatcaaccaacgacaatcag ctccaggatacatacacagagaagtacaccttccctcctggttggtgcgatgtttcgagc atcccagcaacaggctggggcgactga

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