Sorghum bicolor (sorghum): 8082252
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Entry
8082252 CDS
T01086
Name
(RefSeq) transcription factor HY5 isoform X1
KO
K16241
transcription factor HY5
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
8082252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8082252
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
8082252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
DUF3563
TSC22
bZIP_Maf
TPR_MLP1_2
GAS
GIT_CC
DUF5320
CENPH
DMPK_coil
WH_MCM2
FlaC_arch
FmiP_Thoc5
Phlebovirus_NSM
MUCL1
UPF0242
New_glue
DUF3450
Uso1_p115_C
Macoilin
Motif
Other DBs
NCBI-GeneID:
8082252
NCBI-ProteinID:
XP_002437242
UniProt:
A0A1W0VTR7
A0A921Q4W4
LinkDB
All DBs
Position
10:52317089..52320706
Genome browser
AA seq
181 aa
AA seq
DB search
MHVLLTFACSRFITSFEKGFFVGLRFSFPLSKEKKRLFSMESDEEIRRVPEVGLELAGPS
TSGRETTAAAGTAAGAAGTSSASQAATSAARRRGRSPADKEHRRLKRLLRNRVSAQQARE
RKKAYLSELEVRVKDLEKRNSELEERLSTLQNENQMLRQILKNTTVNRRGPGGSSAGGDS
Q
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgcttctgacttttgcttgttctaggttcatcacttcgtttgaaaaaggattc
tttgttggtcttcggttttcctttcctctttcgaaggaaaaaaaaagacttttttcgatg
gagagcgacgaggagatcaggagggtgccggaggtcgggctggagctggccggcccgtcg
acgtccggcagggagacgactgcggctgcgggcacggcggcgggcgctgccgggacgtcg
tccgcgtcgcaggcggccaccagcgccgcccgccgccgcggccgtagccccgccgacaag
gagcaccggcgcctcaaaaggttgcttcggaaccgggtgtcggcgcagcaagcacgggag
aggaagaaggcgtacctgagcgagctggaggtgagggtcaaggacctggagaagaggaac
tcagagctggaggagaggctgtccacgctgcagaacgagaaccaaatgcttagacagata
ctgaagaacaccactgtaaacagaagaggcccaggtggcagcagtgctggtggagatagc
caatag
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integrated database retrieval system
