Sorghum bicolor (sorghum): 8082304
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Entry
8082304 CDS
T01086
Name
(RefSeq) serine/arginine-rich-splicing factor SR34
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8082304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8082304
Spliceosome [BR:
sbi03041
]
Common components
Common spliceosomal components
SR proteins
8082304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
8082304
NCBI-ProteinID:
XP_002467872
UniProt:
C5X0N4
A0A921S635
LinkDB
All DBs
Position
1:complement(66406543..66411568)
Genome browser
AA seq
286 aa
AA seq
DB search
MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAED
AIAGRDGYNFDGHRLRVEAAHGGRGNTSSYDRSSGFGGGGGGARRGVSRHSEYRVLVTGL
PSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFG
RAYIRVKEYDGKRGRSYSRSRSPSRSYSKSRSPSKSPKTRRSSSRSRSRSVSSRSRSASK
GRSPSRSPARSKSPNASPANGEAASPKKQSPNRSPSGSRSPDAKPE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcgctggagccgcacgatctacgtcggcaacctccccggcgacatccgggag
agggaggtggaggatctgttctacaagtatggtagaattgttgacattgacctgaaggtc
cccccaaggccacctggttatgcttttgttgagtttgaagatgctcgtgatgctgaggat
gcaattgctgggcgggatggatacaactttgatggacaccgtctaagagtggaggctgct
catggtggtagaggtaatacttcctcgtatgatcgttcaagtggctttggtggtggcggt
ggtggagcacgtcgtggtgtgtcgagacactcagagtatcgtgttcttgtcactggactg
ccttcttctgcatcatggcaggatttaaaggatcatatgcggaaggctggtgatgtctgt
ttctctgaagtgtatcgcgaaggcggtggcaccgtaggaattgtggactacacaaattat
gatgatatgaaatatgctataaagaagctggatgatactgaattcaggaacgcctttggg
cgagcctatataagggtgaaggaatatgatggcaaacgtggtcgctcctactcacgtagc
cgaagcccaagccgtagctacagtaaaagcaggagcccgagcaaatcacccaagactcgc
cgttcatcatctagatcccggtcgaggtctgtttcttcccgttcaaggtctgcatcaaaa
ggacgttctccgtcaagatcaccagcaagatccaaatctcctaatgcttctccggcaaat
ggtgaagcagcaagccccaagaagcagagcccaaacaggagcccatctggctcacgctct
cctgatgcgaaacctgaataa
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