Sorghum bicolor (sorghum): 8082473
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Entry
8082473 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8082473 isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
8082473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8082473
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
8082473
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
TetR_C_28
Motif
Other DBs
NCBI-GeneID:
8082473
NCBI-ProteinID:
XP_021312261
LinkDB
All DBs
Position
3:53505175..53549515
Genome browser
AA seq
2435 aa
AA seq
DB search
MAASEREAALLTRVAANHLFLGQFEPLRAVLLSLRRRADPGLSADFLRAVAAAGGRVPGV
LWSAPPACPSPSHLAWLAALELAALPSTPNPEALRLKAEFLVLLQPIADDPAIGAEASGI
LTRLLDLGVTRLKREVEGGGEAGAGAEEPPVSEKDLRGLWGVFLDNALVFDALCIGVSRQ
IALDGGGFGVDVLLWLRRNVQLAHLDAMKILVAEGDLDAAAGHLRFLCLDHGLEEDEYKV
VIAELLREGWAKASNYGGTWSELQDRITKLYGAALQCTSPQLVQLVQLILDNILSEEIED
HDVSDANGMPLPFKKFLETLLLEKDTDSDDKILLDTAITSCKKDLYHYCRLSGKHMLEVV
LETALSSIKREQLLEAVDVVSLFPLLHPLVAVLGWDILKGKTALRRKLMQLFWTSKSQGL
RLQEYSHYRSPTDETSCEEYLCDLLCFHLDLARFVSSVNSGRLWNLRNSLLFTQQEQGSD
VNNAEILDPFVENLILERLAVQSPMRVLFDAVPGIKFQDAIELIGMQPLPSTTAAWKRMH
DIELMHMRYSLQSVVLALGEMEKCTGDGNECYYHKALSYLREMQNFMEAIKSSPRKIFMV
SIILSLLHMDDSAKLSQSVPSECYVTHECHDINIESEGKNMVVYFVGLLLDILHHNLQLK
GSEKDHLSSTGLSPAGRQALEWRLKHAKHSIEDLDWRLSVLKRLPPLSERQWSWKEALVL
LRAAPSKLLNLCMQRENYDIGEEAVQRFSLPPEDKASLELAEWVAGAYKRALVEDAVNRA
TDNTNVAHELDILSLRTQLGSLTTILLCVDVAATSAKSGDMCRFLLDEATSLLSEIFPGS
SPKVGPTYWDQIQELATISVIKRILQRLHDILDLEALPSLQVFFTEMSISSSTESSRLGQ
KQRPLGLLHQMIDDAFKGKRQFLSGKLHNVARAIVDEDFDSVYSKEGVNLEKKDVLSSEK
GVLLGHGLRILKQASRSDLASSNVVESSPEHKGSANRYLGPVSTKPSTYLSNFIIYIATI
GDIVDGTDTTHDFNYFSLVYEWPKDLLTRLVFERGSTDAAAKVADTMGVDFVHEIISACV
PPVLPPRTGHGWACIPVIPSICNISSENRLCAIPKSLPPAQGWSANDSSSSSREEPLYPL
QLNLVKHLAQLSSVRAVLACVFGSSILSGDNESSPTHVKDSTQAPETERSFFEFALEQSE
RYPTLNRWIQMQSNLHRVSESSVTDKSEVSLHQSKGKFCMKRTREPDSDGESELEEAVIG
RNTTSSSLESTRHEDTRLEPTTFISFDWENETPYEKAVERLISEGKLSDALAVSDRCLRN
GASDNLLQLLIEHKEEKGPGTGQIHAYGSHNLGNDTWQYCLRLRDKKVAAELALKYLHSW
DLDAATNVLTMCMCHLPENDPMRSEVLHMKQSLQRYGHIMSADDHYTRWQEVEADCEDDP
EGLALRLAAKGAVSAALEVAESASLSIDLRRELQGRQLVKLLTTDPLNGGGPAAASRFLS
TLRDSNDALPVAIGAMKLLPDLRSKQLLVHFFLKRTVGNLSDAEIARLNLWALGLRVLSL
LPLPSQQRCSSLHEHPQLIVEVLLMMKQLHSASLILKEFPSLRDDRLILAYAKKAVSVNV
SSAPRERRLNISASRAKQKKATTPAKTNFVQSFGNFQREARKAFSWVPRDSGTKTPPKDI
LRKRKSSGSGGDRSSWEAMPGLQEERTPVYPSEGQERLPFVSAPDEWVLTGDPDKDDATR
SSHRYETSPDITLFKALISLCTNESVAAKGALKLCMTQMKVVLSSQQLPLDASMDNIARA
YHATETYVQALSYAKNLLKKLVGSSDLSSGSERSKEVDDVSVGTGSSSTGSQYVDELSDL
LAQADMWLGRAELLQSLLGSGIIASLDDIADKESSSRLRDRLVSDERYSMAVYTCKKCKI
DALPVWVAWGHALVRMEHYAQARVKFKQALQQYKGDATSVVTEIINTIEGGPPVDVSSVR
SMYEHLAKSAATIFDDSLSADAYLNVLYMPSTFPRSERSRQSRDPIDNQFTSASSYLEDG
PRSNLDSVRYAECIHYLQDYARPQMLAFMFRHGHYTEACSLFFPFSQPTTEGETSLSSIP
WSDPLTTDYGTIDDLCDLCLGYGAMAVLENTIRTITQSPTYHEAHVTQYMNTVLTRICNY
CETHRHFNYLYNFLVLKDDHVASGLCCIQLFMNSMSQDEALRHLGHAKTHFEEALSVRDR
TIEATKLVLRSARNKSAPGKMTRETIMKYSTRVSYQMDVVKALNSIDGPQWKTSLFGNPT
DPETLRRRCIVVETLAEKHFDLAFRMLHEFDLPAVDIYAGVAASLAERKKGGQLTEFLKN
IRGTIDDDEWDQVIGAAINVYANKHKERPDRLIDMLISNHRKVLACVVCGRLKSAFQIAS
RSGSVADVQYVAHQALHANALPVLDTCKQWLAQYM
NT seq
7308 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcggagcgggaggccgcgctcctcacgcgcgtggcagcgaaccacctattc
ctcgggcagttcgagcccctgcgcgcggtgctcctcagcctccgccgccgcgccgacccg
gggctctctgcggacttcctccgcgcggtcgccgccgcgggcggccgcgtcccgggcgtg
ctctggtccgctccccctgcctgtccgtccccgtcccacctcgcctggcttgccgcgctc
gagctcgccgccctcccctccactcccaatcccgaggcgctgcgcctcaaggcagagttc
ctcgtcctcctccagcccatcgctgacgaccccgccattggcgccgaggccagcggaatc
ctcacgaggctgctggatttgggggtgacgaggttgaagcgcgaggtcgaaggtggaggg
gaggcaggtgctggtgccgaggagccccccgtctccgagaaggatctgagaggactgtgg
ggagtgttcctcgacaacgcccttgtgtttgacgcattgtgcataggcgtctcgaggcag
atcgccttggacgggggtggtttcggcgtggatgtgctcctatggctgcggcggaacgtg
cagcttgcccatttggatgccatgaaaattcttgtcgcggaaggtgatctggatgctgct
gctggccatcttcggtttctttgccttgaccatggactggaggaggatgagtacaaggtt
gtcatagcagagcttctcagagagggatgggcaaaagcatccaattatggtggaacatgg
tctgagttgcaggatagaataactaaattgtatggagcagctcttcaatgtactagtccc
cagctcgtgcaactcgttcagctcattctggataacatcctttctgaagaaattgaagat
catgatgtctctgatgctaatgggatgcctcttcctttcaaaaaatttctggaaacattg
ttgttggagaaggatactgactcagatgacaagatattgttggacacagctataacatcc
tgcaaaaaagatctgtaccattattgccgattgtctggaaagcatatgcttgaagtagtc
ttggaaaccgctctatcatcaattaagagggagcagcttctagaggctgttgatgttgtt
tcgttgttcccccttctccacccactggttgctgtcttgggatgggatattttgaagggt
aaaacagctctgcggagaaagctaatgcagctgttctggacaagcaaatcccaaggtcta
cgactacaggaatattcacattaccgtagcccaacagatgagacatcctgtgaggagtac
ttgtgtgatcttctatgcttccatctggaccttgcacgttttgtttcaagtgttaattct
ggccgcttgtggaatttgaggaattcattgttgtttacccaacaagagcaaggttcagat
gttaacaatgcagaaatattagacccttttgtcgagaacttgatacttgagcggttagct
gttcagagtcccatgagagtgctatttgacgcagtcccaggaataaaatttcaagatgcg
atcgagcttattggtatgcagccacttccttcaacgactgccgcttggaagaggatgcat
gatattgaactgatgcacatgcgatattctcttcagtcagttgtgcttgctctaggagag
atggaaaagtgtacaggtgatgggaatgagtgttattatcataaagcattgtcatatctc
agggagatgcaaaattttatggaggctatcaaaagttctccaagaaagattttcatggtt
agcattatattatccttgttacacatggatgactctgccaaattgtctcaatcagtccct
tctgagtgctatgttactcatgaatgccatgatattaatatcgaatctgagggaaagaac
atggtggtatattttgttgggcttttacttgatatacttcatcataatctccaattaaaa
ggctctgagaaggatcacctttcaagtactggtctgtcacctgctggtagacaagcatta
gaatggaggctcaaacatgccaaacattccatcgaagacttggactggcgtctatctgtt
ctaaaacgtcttccacctctgtctgagcggcagtggagttggaaggaggcattagttctt
ctacgtgctgctccttcaaagttactgaatctatgcatgcaaagggaaaactatgatata
ggagaagaagctgtacaacgattttctttacctcccgaggataaagcttcccttgaacta
gctgaatgggtagctggcgcatataaaagagcattggttgaagatgctgtgaatcgtgcc
acagataatacgaatgtggcacatgaattggatattttgtcattacgcacgcagcttggt
tctttaactacaattctgctttgtgttgatgttgctgcaacatctgctaagtcaggtgat
atgtgccgatttcttcttgatgaggcaacaagcttgttatctgaaatatttccaggaagc
tccccaaaagtaggaccaacttactgggatcagatccaagaacttgctaccatatcagtg
ataaagcgcatccttcagcgtctgcatgacatcctggatctggaagctcttccatctctt
caagtgttttttactgagatgagcatctcttcgtcaacggaatctagcagacttggacaa
aagcaacgtcctcttgggcttctgcaccagatgattgatgacgccttcaaaggaaagcga
cagttcttgagtggtaaacttcacaatgttgctagagctattgttgatgaggactttgat
agtgtttattcgaaggaaggtgtcaacttagaaaagaaggatgttttgagctctgaaaaa
ggtgtactccttggtcatgggcttagaattctaaaacaagcatctaggagtgaccttgca
tcttcaaatgttgtggaaagcagtccagaacacaaaggttctgcaaacagatatttggga
cctgtatctaccaagccgtcaacatatttatcaaacttcataatatatattgcaaccatc
ggtgacatagttgatggaactgacacaactcatgatttcaactacttctcattagtctat
gaatggccgaaagatctattaactcgtctagtttttgagcgtggaagcactgatgcagcg
gcaaaggttgctgacacaatgggtgttgattttgtgcatgagattatatcagcatgtgtg
ccacctgttttacctccacgaacaggacacggatgggcttgcattcctgttatacctagc
atttgtaatattagttcagaaaacagactatgcgccattccaaagtctcttcctcctgct
caaggatggagtgcaaatgattcgtcctcgtcttctcgtgaagaacccctctatcctctc
caattaaatttagtgaagcatttggcccagttatcttcagtaagagcagttttggcatgt
gtatttggaagtagcatactatctggggacaatgaatcatctcctactcatgtgaaagat
tcaacacaagctcctgaaactgagaggtcattttttgaatttgctcttgagcaatcagag
agatatccaaccttgaaccggtggatacagatgcagtctaatcttcatcgagtatccgag
tcttctgtaacagataaatctgaagtctctttgcatcaatccaaaggaaagttttgtatg
aagcgaacccgtgagcctgacagtgatggtgaatcagagcttgaagaggctgtcataggc
aggaacaccacttcaagttcgctagaatccactagacatgaagatactaggctagagcca
acaacttttatctcatttgattgggagaatgaaacaccatatgaaaaagctgttgagagg
ctaattagtgaaggaaaactatctgatgctcttgctgtgtctgatcgttgtttgcgcaat
ggtgcatctgataatttacttcagttgctcattgaacataaggaagaaaaaggtccaggc
acaggacaaattcatgcttatggatctcacaatcttgggaacgatacttggcagtactgc
ttgaggctgagagacaaaaaagttgcagctgagctcgctctcaagtacctgcacagctgg
gaccttgatgctgcgaccaatgtcctaactatgtgcatgtgccacttacctgagaatgat
cctatgcgcagtgaggtgttgcacatgaagcaatctttacaacgttatggtcatatcatg
agtgctgatgaccactacaccagatggcaagaggtagaagctgattgtgaagatgaccca
gagggcttggcactccgtcttgctgccaaaggagctgtttcagctgctttggaggttgct
gaaagtgcctctttatcaattgatttgcggagggagttgcaaggccgccagcttgtcaaa
ctgctaaccactgatccacttaatggtggaggcccagctgcagcttcaagatttctctca
accttaagagattccaatgatgctcttcctgtagccattggtgctatgaagttattacct
gacctgcgttcaaagcagcttcttgtgcatttcttcctcaagcgtacagttgggaatctt
tcagatgctgagattgcacggcttaatttgtgggctttaggtctccgtgttctttcgtta
ttgccattgccatcgcaacagcgttgttcttctctgcacgaacaccctcagttgattgta
gaagtactgttgatgatgaaacaactccattctgcttctttgattttgaaagaatttcct
tccttgagggatgataggttaattcttgcatatgctaaaaaagcagtctccgttaatgtt
agctcagctcctagggaacgtcgactgaatatctctgcgtcaagggcaaaacaaaaaaag
gccacaactccagctaaaacaaattttgtgcaaagtttcggtaactttcagagagaagca
cgcaaagcgttctcatgggtcccccgtgatagtggcactaaaacacccccaaaagatatt
cttcggaaaagaaagagttctggctctggaggtgatagatcctcttgggaagcaatgcct
ggtttacaggaggagcggacacctgtatatccctctgaggggcaagaacgacttcctttt
gtctctgctcctgatgaatgggtgctgacaggagaccctgacaaggatgacgcaactcgt
tcatcccatagatatgaaacctctcctgatatcacactgttcaaggcattgatatccttg
tgcaccaatgagtcagtagctgcaaaaggtgcacttaaattgtgtatgactcagatgaag
gttgtgctaagctcccaacagttgccccttgatgcctctatggacaacatagcccgggct
tatcatgcaacggaaacttatgtacaggcactctcttatgcaaagaatctacttaaaaag
ctcgttggtagtagcgatttgtcaagtggctctgaaagaagtaaggaagttgatgatgtt
tctgtgggcactggcagttcaagcactgggagccagtatgtggatgagctgtctgatctc
ctggctcaagcggacatgtggttagggcgtgcagagcttcttcaaagcctgctgggatca
ggtattattgcctcgctggatgatatagctgacaaagaatcttcaagtagattacgtgac
agattggtcagcgatgaacggtacagcatggctgtatatacttgtaaaaagtgcaagatt
gatgctttaccggtatgggtagcatggggccatgcattagttcgaatggagcactatgct
caagcccgtgtgaagttcaagcaagcacttcaacaatacaaaggcgatgcaacttctgtt
gtcactgaaataatcaacacaattgaaggagggcctccagttgatgtttcttctgtccgt
tccatgtatgagcatttggcaaagagcgcggcaaccatctttgatgattccctttctgct
gatgcttatcttaatgttctgtacatgccatcgacatttccacgatctgagaggtcccga
cagtccagagatcctatagacaaccaattcacgtctgctagttcctaccttgaagatggc
cctcgcagcaatcttgatagtgtccgatatgctgagtgcattcactacttgcaagattat
gctcggccacaaatgcttgctttcatgttcaggcatggccattacactgaagcatgctct
ctgttcttcccattcagtcaaccaaccacagaaggggaaacatctttgtcttcaattcca
tggagtgatcctttaacaactgattatgggacaattgatgacttgtgtgatctctgtctt
ggatatggtgctatggctgttttggagaatacaatacggacaataacacaatcgcccaca
tatcatgaggcacacgtgactcagtacatgaacacagttctcactcgcatttgcaactat
tgtgaaacacataggcattttaattatctctacaacttcctggttctaaaagatgaccat
gttgcttctgggctttgttgtattcaattatttatgaattcaatgtctcaagatgaggct
ttgaggcatttgggacatgccaagacacatttcgaagaagccttatctgtacgagataga
acaatcgaggctacaaagttggtattgcggtctgctcggaataagagcgcacctggaaaa
atgaccagggaaacgataatgaaatattccactcgtgtttcttatcagatggatgtggtg
aaggccctcaatagtatagatggtcctcagtggaaaacttccctttttgggaatccaact
gaccctgaaactctgaggcgaaggtgcatcgttgttgaaacgctggctgaaaagcatttt
gatttagctttcagaatgcttcatgagtttgatctcccagctgttgatatttatgctggt
gtagctgcatccctcgcagaaaggaaaaaagggggccagttgacagaattcttgaagaat
ataagggggactatagatgatgatgaatgggatcaggttattggtgctgctataaatgtt
tatgccaacaagcataaagaaagaccagatcgcctcatcgacatgctaatcagcaatcac
aggaaagtacttgcttgtgttgtctgcggacgtctaaaaagtgcgttccaaatagcctca
cgaagtggaagtgtcgctgatgttcaatatgttgctcatcaggcattacatgcaaatgca
ttgccggtacttgatacgtgtaagcaatggctcgctcagtacatgtga
DBGET
integrated database retrieval system
