Sorghum bicolor (sorghum): 8082670
Help
Entry
8082670 CDS
T01086
Name
(RefSeq) protein OPAQUE1
KO
K10357
myosin V
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
8082670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8082670
04131 Membrane trafficking [BR:
sbi04131
]
8082670
03029 Mitochondrial biogenesis [BR:
sbi03029
]
8082670
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbi04812
]
8082670
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
8082670
mRNA cycle factors
P-body specific factors
8082670
Membrane trafficking [BR:
sbi04131
]
Others
Actin-binding proteins
Myosins
8082670
Mitochondrial biogenesis [BR:
sbi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
8082670
Cytoskeleton proteins [BR:
sbi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
8082670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Zeta_toxin
ABC_tran
DUF4548
Flp1_like
AAA_22
INTS1_R4
TraG_N
Motif
Other DBs
NCBI-GeneID:
8082670
NCBI-ProteinID:
XP_002452906
UniProt:
C5XTK8
LinkDB
All DBs
Position
4:65318969..65336712
Genome browser
AA seq
1520 aa
AA seq
DB search
MSFRKGLKVWVEEKGEGWVEAEVAEAKERAVVVLTSQRKKITVSPEKLLPRDTDEDLGGG
HVDDMTKLTYLNEPGVLYNLKKRYALNEIYTYTGSILIAVNPFTRLPHLYNEYMMEQYKG
IRLGELSPHVFAVADASYRAMVNDSRSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAL
DDRTVEQQVLESNPLLEAFGNAKTVRNDNSSRFGKFVEIQFDGSGRISGAAIRTYLLERS
RVVQITDPERNFHCFYQLCASGKDAELYKLGHASSFHYLNQSNTYDLEGTNNEDEYWKTK
RAMDIVGISREDQDAIFRTLAAILHLGNIEFAPGKDTDSSKIKDSTSNFHLQTAAKLFMC
DSDLLVSTLCSRSIHTREGIIVKALDCAAAAANRDALAKTVYARLFDWLVENINKSIGQD
VDSKVQIGVLDIYGFESFKNNSFEQFCINFANEKLQQHFNEHVFKMEQEEYKSEEINWSY
IEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFATKMFRNFSSHPRLEKTKFSET
DFTISHYAGKVTYQTDSFLEKNRDYIVAEHCNLLSSSRCPFVSGLFTSLPEESIRSSYKF
SSVASRFKLQLQALMETLNSTEPHYVRCVKPNSANRPQLFENQSVLHQLRCGGVLEAVRI
SLAGYPTRRTYAEFVDRFAVLVPELMIGSYDERMLTKGILEKMELENFQLGRTKVFLRAG
QIAILDMRRAEVLDNAARHIQGRFRTFITRKEFVKTREASVSVQAYCRGCLARKMYAIRR
ETAAAVIVQKYVRRWILRRAHLQACLAALLIQSYIRGFIARRYFSAIREHKAATVIQSIW
RRRKVVMLFQNCRQAAVTIQCSWRQKLARKELRRLKMAANEAGALREAKNKLEKKMDDLA
LRLTLERRLRAASEDSKSAEILRRDKIIESLSAECAAAKSAAQNEHDKNLLLQKQLDDSL
REIAMLQSKKIMSAEAEKENSNLKNLVESLSMKNSILENELTVTRKSSDDTMEKLKDVEG
KCNHLQQNLDKLQEKLTNLENENHVLRQKAFNMPTMNNLPVAPKTLSEKFSASIGLPISE
PKHIYESPTPTKYLASLPQSLSASRRSRLPVERHEQNHEILLKCIKENLGYKDGKPVAAC
IIYKCLLHWRAFESERTAIFDHVIEAINDVLKGTEADGRLPYWLSNTSALLCLLQRNLRS
NGLFATPSRRSGGAIGKIAQTLRSPSKFVGRSDTLPQVDARYPAILFKQQLTACVEKIFG
QLRDNLKKEISPLLNLCIQAPKSTRGQPGKTSKSPGVGAHLASNSNWDNIVNFLDLLMDT
LRENYVPSFFIRKLITQLFSFINIQLFNSLLLRRECCTFSNGEYVKAGLSLLEKWITDVT
EEFAGTSWHELNYIREAVGFLVIHQKRKKTLQEIRQDLCPSLSVRQIYRICSMYWDDKYN
TQGISTEVVAAMREVVNKDTQNLLSNSFLLDDDLSIPFSTEDLSMAIPAIDYADVDLPEC
LQHYTSVQFLIRQQDLQPAQ
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccggaaggggttgaaggtttgggtggaggagaagggggaagggtgggtggag
gcggaggtggcggaggcgaaggagcgcgccgtcgtcgtgctcacgagccagcggaaaaag
attacagtttcgccagagaaattattgcccagggatacagatgaagatctgggtgggggt
catgtcgatgacatgacgaaactaacatatctaaatgaaccaggtgttctttacaatctg
aaaaaaagatatgcattgaatgagatatacacatacaccggaagcatcttgattgctgtt
aatccttttacaaggctgcctcacctgtacaacgaatacatgatggagcaatataagggc
atccgattaggggagttgagtccgcatgtttttgcagtggcggatgcatcatacagggct
atggtgaatgattcccgaagtcagtccatcctggttagtggtgaaagtggtgctggcaaa
accgaaacaacgaagcttattatgcagtatctgacctttgttggtggtagagccgctctt
gatgatcgaacggttgaacaacaggttcttgaatctaaccctcttttggaggcatttggc
aatgcaaaaacagtacggaatgataactcaagtcgatttggaaaattcgtagagatacag
tttgatggaagtggtagaatatctggagctgctattaggacctatctcttggaaaggtcc
cgtgttgtgcaaattactgatcctgaaaggaattttcattgcttctaccaattgtgtgct
tctggaaaggatgcagagctgtacaaacttgggcatgcaagcagttttcattacttgaat
caaagcaatacatatgatttggaagggacaaacaatgaagatgagtactggaagacgaaa
agggcaatggatattgttgggattagcagagaagatcaggatgctatatttcggacattg
gcagccattcttcatcttggcaatattgagtttgccccaggaaaggataccgattcttca
aaaattaaggattcaacctcaaattttcatctccaaacggcagctaaattatttatgtgt
gattcagatctattggtctcaacactatgtagccgttctatacatactcgtgaaggaata
attgttaaagcattggactgtgctgctgccgcagctaatcgtgatgctctagcgaagact
gtatatgcaagattatttgactggcttgttgagaatattaataagtctattggtcaagat
gtggattccaaggtacaaattggtgtcctggatatctacggctttgaaagcttcaaaaac
aacagctttgaacagttttgcattaactttgcaaatgaaaaacttcagcaacactttaat
gagcatgtattcaagatggaacaggaggagtacaaaagcgaggaaattaattggagctac
attgagttcattgacaatcaggatgtgctggatttgattgaaaagaaaccgattggaatt
attgcactgctggatgaagcttgcatgtttcccaaatctacgcatgagacctttgcgaca
aagatgttcagaaacttctcttcccatcctaggcttgagaagacaaaattctcagaaaca
gattttaccatctcacactatgctgggaaggtcacgtatcaaacagattcttttttggaa
aagaatcgagattatattgttgcagagcactgcaatcttctatcatcttcaaggtgccca
tttgtttctggacttttcacttcattgccagaagaatctataagatcctcgtacaagttt
tcatcagttgcttccagattcaagctacaactgcaagccctcatggaaaccctaaactca
actgaacctcactatgtacgctgcgtgaagcctaactctgctaatcgacctcagcttttt
gaaaatcaaagcgtattgcatcagctacgttgtgggggtgtcttagaggctgtccgtatt
agtcttgctggctatcctaccagaaggacttatgctgaatttgttgaccggttcgcggtt
ctagttccagagttgatgattggaagttacgatgaaagaatgctgacaaagggtattctc
gaaaagatggagcttgaaaattttcaacttggtagaacaaaggtgttccttagggctggt
caaattgcgatattagatatgcgccgtgctgaggttttggacaatgctgcacgacacatt
caaggccgtttcagaacatttatcacacgcaaagaatttgtgaaaacaagggaggcttca
gtttctgtacaagcatactgcagaggctgtttggcaaggaagatgtatgcaatcaggcgt
gaaacagcggcagctgtaattgttcagaagtatgtccgaagatggatcctacgtagagct
cacctgcaagcatgtttggcagctcttcttattcagtcttatattcgagggttcatcgct
cgccgctatttctctgccattagggaacataaagctgctacagtgatacagtctatatgg
agaagacggaaggttgtcatgcttttccagaattgtcggcaagccgctgtgacaattcag
tgttcttggagacagaagcttgcaagaaaggagctaaggagacttaaaatggctgcaaat
gaagctggtgcactgcgtgaggcaaagaataagcttgagaaaaagatggatgatcttgct
ttaagacttacccttgaaaggagactgcgggctgccagtgaagactcaaaatcagcagaa
atattgaggcgtgacaaaataattgaatcattaagtgcagaatgtgctgctgctaagtca
gctgctcaaaatgagcatgacaaaaatttgttgctccaaaagcagttggacgattctttg
agagagattgctatgttgcagagtaaaaagattatgtcagcagaagcagaaaaagaaaac
tccaacctaaagaacctagtcgaatcattatctatgaagaactcaatactggagaacgaa
cttactgtgactcgtaaaagtagtgatgatacaatggaaaaattgaaggacgtcgagggt
aaatgcaaccatctacagcaaaacttggacaaattacaggagaaacttacaaacttggaa
aatgaaaatcatgtcttaagacagaaggcatttaatatgccgacaatgaacaatctgcct
gtagctccaaagacattatctgagaaattttctgcatcaattggacttcccatcagtgag
ccaaagcatatatatgaaagcccaacacctacaaaatatctggcttcgcttccacagagt
ttgagtgcatcaaggagatcgaggttgcctgttgaaaggcatgagcaaaatcatgaaatt
ttattgaaatgcatcaaagaaaatttaggatataaggatggcaaaccagttgcagcatgt
atcatttacaaatgtcttttgcattggcgtgcttttgaatcggagcgaactgctattttc
gatcatgtgattgaggccataaatgatgtcctcaaggggactgaagctgatggtagatta
ccttattggttatccaatacctctgcattgttatgccttctgcaaaggaatctgcggtca
aatggattatttgctaccccatctcgtcgttctggtggagctatagggaaaatagcgcaa
acgttgaggtctccttcgaagtttgtaggccgcagtgatactctaccacaagttgatgca
cggtatccagctatactattcaaacagcagcttactgcatgtgtcgaaaagatcttcggg
cagctcagagataatctaaaaaaggaaatatcacctctacttaatctttgcattcaggct
ccaaaatcaacacgtgggcaacctggaaaaacatccaagtcacctggagttggtgcccac
ctggcatcgaactccaactgggacaatatcgtcaatttccttgacttgcttatggataca
ttgcgcgaaaattatgtgccatccttctttatacgtaaacttatcacacaattattctct
ttcatcaatatacagttgtttaacagtcttcttctccgacgtgaatgttgtacattctcc
aatggggaatacgtgaaagctggtctgtcattgttggagaaatggattactgatgtcaca
gaggagtttgcgggtacatcttggcatgagctaaattatatcagagaagctgttggattt
ttggttatacaccaaaagagaaaaaagacgcttcaggagatcaggcaagatctttgcccg
tccttgagtgttcgccaaatctatagaatatgctcgatgtattgggatgacaaatacaat
acccaaggcatttcaactgaggtggttgctgcaatgcgggaggtggttaacaaagatacg
cagaatcttctgtcaaattccttcttgttggatgatgacttaagtataccattctccacc
gaggatctgtcaatggctatcccggcaatagattatgctgacgttgatcttccagaatgt
cttcagcactacacatcagtacagtttctaataaggcagcaggatctacagcctgcccaa
tag
DBGET
integrated database retrieval system
