Sorghum bicolor (sorghum): 8082689
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Entry
8082689 CDS
T01086
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3 isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03440
Homologous recombination
sbi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
8082689
03460 Fanconi anemia pathway
8082689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbi03032
]
8082689
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8082689
Enzymes [BR:
sbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
8082689
DNA replication proteins [BR:
sbi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
8082689
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
8082689
Bloom's syndrome complex (BTR)
8082689
FA (Fanconi anemia) pathway
8082689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
8082689
NCBI-ProteinID:
XP_021314891
LinkDB
All DBs
Position
4:complement(65450686..65455899)
Genome browser
AA seq
779 aa
AA seq
DB search
MKGVLQIKGASGREKKAPKELESVLNQYFGYSGFRGKQLEAIEAVLSGRDCFCLMPTGGG
KSMCYQVPALVKTGIVLVISPLIALMENQVASLKNKGIPAEFLSSTQASHTKQRIHEDLD
TGNPSLKLLYVTPELVATSGFMAKLKKLYNRGLLGLVAIDEAHCISTWGHDFRPSYRKLS
SLRKQFPDIPLLALTATAVPKVQKDVISSLCLQNPVILRASFNRPNIFYEVRYKDLLDDV
YSDISNLLKSSGNACSIIYCLERAACDDLSMHLSQQGVSSAAYHAGLNSKVRSSVLDDWL
SSRTQVVVATVAFGMGIDRQDVRIVCHFNLPKSMESFYQESGRAGRDQRPSRSVLYYGLD
DRRRMEFILRNPKINKAQPSSSSNELSEKALADFSQVLTVKHIHWSTRPCSLFKSIMLPH
LMQIVDYCESSSCRRKKIIESFGEKVQPTLCQRSCDACKHPNLVSSRLEELRRVPNCRFN
KISPVFQSSVKPAHLDTEFWNREDEASISAEDISDSDDGNEVVSNIAISKVPAKAGLDAK
FKALERAENAYYQGKGQTKQQGGGLADKKSISQTLRDACRKRLLDALGQAKLRLGNIPCD
DEASATHLETECFKKYEKVGKTFYNSQIAATVRWLSSATSSQMHDRLHAVIDQTKDDGAS
GSPDIVPESPPASPKIVGTKPGETSNYEADVKPQHICKLGKRGHSDVSTEGAAASTGNME
LPSIPTGNMVLPAIPTFREFLSQKGRDRAKSYSNSQPSGIRRKSSGQVDKEETSKRMKS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcgtacttcagattaagggggcatcagggcgtgaaaagaaggctcctaaggag
ctcgagagtgtcttgaaccaatatttcggatattcgggatttcgaggaaaacaactggaa
gctatagaagctgttctatcaggaagagattgcttttgtttgatgccaactggcggtgga
aagtccatgtgctatcaggttccagctctggtgaagacaggcattgttcttgtcatttca
cccttgatagcgctgatggagaaccaggttgccagcttgaaaaataaagggattccagct
gaatttctctcatcaacacaggcatctcacactaaacaaaggatacatgaagaccttgat
actggtaatccttctttaaagttgctatatgtcactcctgagcttgttgcaacatcaggc
tttatggcaaagctaaagaagctctacaacagaggtcttcttggtcttgttgctattgat
gaggctcactgtatttcgacttggggccatgatttcagacctagctatcgcaagctttca
tcattgaggaagcagttcccagatatccctttgttagctttaactgcaactgctgtcccg
aaggtccagaaagatgtgatatcatcactgtgcctgcaaaatccagtgattcttagagct
tcatttaatcgacccaatatattctatgaagttcgttacaaggatcttcttgatgatgtt
tactctgatatatcaaatttactgaagtcaagcggaaatgcttgctcaattatatattgt
cttgaacgggcagcttgtgatgatctaagcatgcatttgtcacagcagggtgtctcttct
gctgcttatcatgctggcctaaatagcaaagtgcgaagttctgttctcgatgactggctt
tcgtcgagaactcaagttgttgttgcaactgtagcctttggaatgggtattgatagacaa
gatgtccgtattgtatgccacttcaacttgcctaagtcaatggaatccttctatcaggag
tcaggtcgagctggtcgtgatcaacgaccttcaagaagtgttttgtattacggattagat
gaccggaggagaatggaattcattttgagaaaccccaaaattaacaaagcacaaccgtct
tcctcttcaaatgagctttctgagaaggctctagctgacttcagtcaggttcttactgtc
aaacatatacattggtctactaggccatgcagtttattcaagtctattatgttgcctcac
ttgatgcagattgttgactactgtgaaagttctagctgccggcgaaaaaagatcattgag
agctttggagagaaagtacaaccaactttatgccaacgctcatgtgatgcttgcaagcac
ccaaatttagtgtcgtcacgtctggaggaactccgtcgtgtgcccaactgtcgctttaat
aagatctccccagtgtttcaaagctcagttaaaccagcacacttggacacagaattctgg
aatcgtgaagatgaggcaagcatatcggctgaagacatctcagattctgatgatgggaat
gaggtggtgagtaatatagccatttcaaaggttccagcaaaagctggtctggatgcaaaa
tttaaagctctggagcgtgctgaaaatgcttattaccaaggaaaaggtcagaccaagcag
cagggtggtggccttgctgacaagaaaagcatctctcagacgctaagagatgcatgccgg
aaaagattgttggatgctcttggacaagcaaagctgcgacttgggaatattccgtgcgac
gacgaggcttctgctacacaccttgaaacagagtgcttcaaaaaatatgagaaagtgggc
aagacgttctacaactcacagatagccgccacagttcggtggctgtcatccgcaacatcc
agtcagatgcacgaccgcctccatgctgttatcgaccaaactaaagatgatggtgcatca
ggctcccccgacattgttccagagtcacctccagcatctcctaaaatcgtcggcacaaag
ccaggagaaaccagtaactatgaagctgacgtcaaaccacagcatatttgtaagttgggg
aaaaggggacattcagatgtgtctacagagggtgctgcggcatcgactgggaacatggag
ctcccctcaataccaactgggaacatggtgctccccgcgataccaacgttcagagaattc
ttgagccaaaaaggaagggatcgggcaaagagctattcaaattcccagccatctggtatt
cgtaggaagtctagtggtcaggttgataaggaagaaaccagcaagaggatgaaatcatga
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