Sorghum bicolor (sorghum): 8082712
Help
Entry
8082712 CDS
T01086
Name
(RefSeq) glutamate receptor 2.8
KO
K05387
glutamate receptor, ionotropic, plant
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbi04040
]
8082712
Ion channels [BR:
sbi04040
]
Ligand-gated channels
Glutamate (ionotropic)
8082712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Peripla_BP_5
HEV_ORF1
Motif
Other DBs
NCBI-GeneID:
8082712
NCBI-ProteinID:
XP_021314952
LinkDB
All DBs
Position
4:65860611..65867217
Genome browser
AA seq
1012 aa
AA seq
DB search
MGRLLRYYSSCSHSAPSLRHRHHLGLVLAAALLVWCQASLLPVATAQQQQQQQQPAPAPR
VRVGVILNLTSLVGQRRKVGIEMAVEDYYAAFPGSSTRVALRFRDSDGDVVGAASAAVDL
IKNEQVQAIIGPQTSAEAEFVAYLGNRTHVPVLSSSATSPALSPSQTPFFVRTTVNDSFQ
AEPVAAVLAAFGWHAAAVVYEDSPYGLGILPALAAALQGVGARVTDRTAVPSDADDDRID
LMLYVFKAMPTRVFVVHMNALLAARFFRRARMAGMMTEDYAWVATDGVGSVVDALSPDDI
SAMDGVVSLRPFVQVTDRVRNFSARFRARLRREYPSADIYPHDPTVMMLWSYDTAWAIAA
AAEAAGVSSPAFQTPPQSAAVTDLDRLGVSATGATLLKAVRETTFRGLAGNFALVDGQLQ
PPAYEFVNIVGKSSRAVGFWTSEAGITQTLGAHGANKGLKKILWPGDSTSAPRGWVVSPN
GKKLRVAVPVKHGFKEFVDVGGESTTTGGHPNITGYCIEVFDAVMSKMPYPVSYEYVPFP
SSSESYEYLVSLVPEQKADIVVGDVTITASRMGKVDFSMPFSDSGWSMVVAVRTETSTSM
WIFLQPLTTSLWLASLAFFCFTGFVVWAIEHRINPEFRGTPWQQFGLIFYFSFSTLVFSH
KEKLESNLSRFVVIIWVFVVLILTSSYTASLTSMLTVQKLQPAVTDVRELQRTGAHIGYQ
EGTFIKQQLQKLGFDEAKMKSYSTAEKYADALSSGQVAAVFDEIPYLKLFLSQYCDGYTM
VGPVYKTDGFGFVFPMGSPLTPDVSRAVLTLAEGEEMALIEKKWFGEPGKCPSQGAGGAT
AALGSSNLSFRSFGGLFLITGVVSGLMLLVYLVTFVYRERGEIRPEPEEEGSGSSSMRRL
RAWLRHFDQKDLKCPTFKTGNDDSIRDGNQTQRWAEFESVRNGRGGNGPVQAAAEEEAIA
IAMSPLSFSTSTPSERINAGSSPASELGTSFEQRMQEAPHSVSVDMPGSTAP
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggggaggctgctgcgctactactcgtcgtgctctcactccgccccctccctccgccac
cgccaccacctggggctcgttctggcggcggcgctgctggtctggtgccaggccagccta
ctgccggtggccacggcgcagcagcagcagcagcagcagcagccggcgccggcgccgcgg
gtgcgcgtgggcgtcatcctcaacctgacgtcgctggtcgggcagcggcggaaggtcggc
attgagatggcggtggaggactactacgccgcgtttccgggctccagcaccagggtcgcg
ctgcgcttccgtgactccgacggggacgtcgtcggcgccgcttccgccgcggtggacctg
atcaagaacgagcaggtgcaggccatcatcggcccgcagacgtcggcggaggccgagttc
gtggcctacctcggcaaccgcacccacgtgcccgtgctctcctcctccgccacctcaccg
gcgctctccccgtcgcagacgcccttcttcgtgcgcaccacggtcaacgactccttccag
gccgagcccgtcgccgccgtcctcgccgcgttcggctggcacgcggcggctgtcgtctac
gaggactcgccctacggattgggcatcctcccggcgctcgccgccgcactgcagggtgtc
ggcgccagggtcacggaccgcaccgccgtgccgagcgacgcggacgacgaccgcatcgac
ctgatgctctacgtcttcaaggcgatgccgacgcgcgtgttcgtcgtgcacatgaacgcc
cttctcgccgcgcggttcttccgccgggcgaggatggccggcatgatgacggaggactac
gcgtgggtcgccaccgacggcgtcggtagcgtcgtggacgcgctgagccccgacgacatc
agcgccatggatggggtcgtcagcctccggccgttcgtgcaggtgacggaccgagtgcgc
aacttctccgcacggttcagggcgaggctccggcgggagtacccgagcgccgacatctac
cctcatgatccgaccgtcatgatgctctggtcgtacgacacggcgtgggcgatcgcggcg
gcggccgaggcggccggtgtctccagcccggcgttccagacaccaccgcagagcgcggcg
gtcacggaccttgaccggctcggcgtgtcggcaaccggagcgacgctcctcaaggcggtg
cgcgagacgaccttccgtggcctcgccggcaacttcgccctcgtcgacgggcagctgcag
ccgccggcatacgagttcgtcaacatcgtcgggaagagttcgagggcggtggggttctgg
acgtcggaggctgggatcacgcagactctgggcgcccacggcgccaataaaggtctgaag
aaaatcctttggccaggtgattcgacgtccgccccaagaggttgggtcgtgtctccgaac
ggaaagaagcttcgtgtcgccgtgccggtgaagcatgggttcaaggagttcgtcgacgtc
ggcggtgagtcgacgacgacaggaggacatccaaacatcacaggctactgcattgaggtg
ttcgacgcggtcatgagcaagatgccatatcctgtgagctacgagtacgtgccgttcccc
agcagctccgagtcctacgagtatctcgtgtccttggtgccggaacagaaagcggacatc
gtcgtcggcgacgtgacaatcacggcgagcaggatgggcaaggtggacttcagcatgcca
ttctcggactcggggtggtcgatggtggtggcggtgcgcacggagacgagcacgagcatg
tggatcttcctgcagccgctgaccaccagcctgtggctcgccagcctcgccttcttctgc
ttcaccggcttcgtggtgtgggccatcgagcaccggatcaaccccgagttccgaggcacg
ccgtggcagcagttcggcctcatcttctacttctccttctccacgctcgtcttctcgcac
aaggagaagctggagagcaacctgtcgagattcgtggtgatcatctgggtgttcgtcgtc
ctgatcctgacgtcgagctacacggcgagcctgacgtcgatgctgacggtccagaagctc
cagccggcggtgaccgacgtgagggagctccagcggaccggggcccacatcgggtaccag
gagggcaccttcatcaagcaacaactccagaaactaggcttcgacgaggccaagatgaaa
agctacagcacggcggagaagtacgccgacgcgctgtccagcgggcaggtcgccgccgtg
ttcgacgagatcccgtacctgaagctcttcctgtcgcagtactgcgacggctacaccatg
gtcggcccggtctacaagaccgacggcttcgggttcgtcttcccgatgggcagcccgctg
acgccggacgtgtcgcgcgcggtcctgacgctggcggaaggcgaggagatggcgctgatc
gagaagaagtggttcggcgagccgggtaagtgcccgagccagggcgccggcggcgccacc
gccgccctcggctcctccaacctcagcttccggagcttcggcgggctgttcctcatcacc
ggcgtcgtgtccggcctcatgctcctcgtctacctcgtcacgttcgtctaccgcgagcgt
ggagagatccggccggagccggaggaggaagggtcggggagttcgtcgatgcgccggctg
cgcgcttggctgcggcacttcgaccagaaagacctcaagtgccccacgttcaagacgggg
aacgatgactccatcagggatgggaaccagacgcagagatgggctgagtttgagtccgtc
aggaacggccgtggcgggaacggaccggtgcaggcggcggccgaggaggaagccattgcc
attgccatgagcccgctcagtttcagcacctccactccgtcggagaggatcaacgccggt
tcgtcgccggcgtcggagcttgggacctcgttcgaacagaggatgcaggaggcgccacac
tctgtgtcggtggacatgccaggatcaacggccccgtaa
DBGET
integrated database retrieval system
