Sorghum bicolor (sorghum): 8082730
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Entry
8082730 CDS
T01086
Name
(RefSeq) autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
8082730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8082730
03029 Mitochondrial biogenesis [BR:
sbi03029
]
8082730
Membrane trafficking [BR:
sbi04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
8082730
Mitochondrial biogenesis [BR:
sbi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
8082730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
Beta-prop_IFT140_1st
WDR55
Beta-prop_IFT140_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
8082730
NCBI-ProteinID:
XP_021313896
LinkDB
All DBs
Position
4:complement(66187426..66190960)
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AA seq
371 aa
AA seq
DB search
MASSSSPSQIICVSFNQDNSMFSVGTKDGFKIFDARNGRLCYEKNLGGFNIVEMLFGTNL
LAIVGTGEQPAMSPRRLCLFNTKTGASKRDLNFKTSILAVRLSRKRLVVVLQDRTFVYDL
NSTTILDEIETVPNTKGLCAFAPNSEECYLALPASTSKGSALVYKASKPELICQIDAHQA
PLAAMVFSLNGLYLATASEKGTMIRVHLVAQATKSHSFRRGTYPSTIYSLTFSPSVDLPD
VLVATSSSGSLHMFFLDASRNARRQANTLLSSVIPGSVTDALDPANHHVIHHVVTADIKS
CLAVHSVENSQNSSKFPALKTVIYIVTHDGYFREYLISTTKSNESSWLLLREFNLLDACS
GSPKQNEQHID
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagctcgtctccgtcgcagatcatctgcgtctccttcaatcaggacaacagc
atgttttctgtcggcaccaaggatgggtttaagatcttcgacgctcgtaatgggaggctc
tgctatgaaaagaatcttgggggattcaacattgtggaaatgctatttggcacaaaccta
cttgccattgtcggaactggtgaacagcctgctatgtctcctcgtcgtctgtgcttgttc
aataccaaaactggagcatcaaagagagatctgaactttaagacttcaattttggctgtt
cgattaagtaggaagaggcttgttgttgtattgcaggataggactttcgtttatgacctc
aatagcactactatattggatgaaattgaaacggtaccgaatacaaaaggtttatgtgca
tttgctcctaattctgaagagtgttatttggctctccctgcaagcacatccaaaggatct
gctttagtatacaaagcatcaaaaccggaattaatatgccagatagatgctcatcaagct
ccattagctgcaatggttttttctttgaatggtttgtacctggcaacagcttctgaaaag
ggtactatgattagagtgcatcttgtcgcacaagcaaccaagtcacatagttttcggcga
ggaacatacccatcaacgatctattcactgacatttagtccctctgttgatcttcctgac
gttcttgttgccacaagttcatcaggctctttgcacatgtttttccttgatgcttctagg
aatgcaaggagacaagcaaatacattgctcagttcagtgattcctggatctgtaactgat
gctttggatccagctaatcatcatgttattcaccacgttgtcactgcagacatcaaaagc
tgtctggcagtacacagtgttgaaaattcccaaaattcttccaaatttcctgcattgaag
actgtaatttacattgttacacatgatggatacttccgagagtatctgatcagcacaacc
aagtcaaatgaatcttcgtggttgttgctgcgtgaatttaatctcctggacgcttgttcg
ggtagtccaaagcagaacgagcagcacatagactga
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integrated database retrieval system
