Sorghum bicolor (sorghum): 8082914
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Entry
8082914 CDS
T01086
Name
(RefSeq) 26S protease regulatory subunit S10B homolog B
KO
K03064
26S proteasome regulatory subunit T4
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
8082914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sbi03051
]
8082914
Proteasome [BR:
sbi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
8082914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
RuvB_N
AAA_5
PRS7_OB
AAA_22
nSTAND3
DUF815
TIP49
Prot_ATP_ID_OB_N
AAA_7
AAA_14
Parvo_NS1
RNA_helicase
Mg_chelatase
AAA_33
Sec8_N
Sigma54_activat
AAA_3
NACHT
AAA_28
AAA_18
IstB_IS21
AAA_24
NPHP3_N
TsaE
bpMoxR
ABC_tran
AAA_lid_PRS2_C
ATPase
AAA_11
eIF-1a
ATPase_2
AAA_25
PhoH
ResIII
Motif
Other DBs
NCBI-GeneID:
8082914
NCBI-ProteinID:
XP_002453495
UniProt:
C5XXK3
LinkDB
All DBs
Position
4:complement(6807375..6812154)
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AA seq
400 aa
AA seq
DB search
MADGEDAAAARRRAAITDYRKKLLNCRELESRVGTVRESLKNAKKDFTKTEDDLKSLQSV
GQIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPR
EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY
GPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD
EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPG
RLDRKIEIPLPNEQSRMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMA
AIRAERDYVVHEDFMKAVRKLNDAKKLESSAHYSADFGKE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggggaggacgccgccgccgcgcgccgccgggccgccataaccgactaccgc
aagaagctgctcaactgcagggagctcgagtcgcgcgtcggcaccgtgagagaaagcctt
aaaaatgcaaagaaggattttaccaagactgaagatgacttgaagtctctgcagagcgtg
gggcaaataattggagaggttctccggcctcttgataatgagcgctttattgtgaaggcc
agcagtggtccccgatatgtggtcggttgccgaagtaaagtggacaaggagaagttaaca
tctggaactcgtgttgtacttgacatgacgaccttgacaataatgcggactcttccacgg
gaggtggatcctgtggtatataacatgcttcatgaagatccaggaaatgtcagttactcc
gctgtaggcggtttgtctgatcagattagagagctcagggaatccattgagttaccactt
atgaaccctgaactctttcttcgggtgggaattaagcctcctaagggtgttctactctac
ggtccaccaggaactgggaagaccctattggcaagggctatcgcaagtaacattgatgcc
aactttttgaagattgtttcaagtgctattattgacaaatacattggagaaagtgctcgt
ttgattagagaaatgtttggctatgcacgtgatcaccaaccatgcatcatcttcatggac
gaaattgatgccattggtgggcgaagatttagtgagggaactagtgctgatcgtgagatc
cagcggacattgatggagctccttaaccaattagacggatttgacgagctaggaaaggta
aagatgatcatggccacgaaccgacctgatgttctggaccctgcgctcctgcgtcctgga
cgtttagacaggaagattgaaattccgctacccaacgagcaatcaagaatggaagttcta
aaaatccatgcagctggtatcgccaaacatggggaaattgattatgaagcagttgtgaaa
ctagctgaaggtttcaatggggctgatcttcggaacgtgtgcactgaagctggtatggct
gcaattcgtgcagagagagattatgtagtccacgaagacttcatgaaggctgtgcggaag
ctaaatgatgcaaaaaagctggaatcgagtgcacattacagtgcagattttggcaaggag
taa
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integrated database retrieval system
