Sorghum bicolor (sorghum): 8082955
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Entry
8082955 CDS
T01086
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8082955
Enzymes [BR:
sbi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
8082955
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
Other ribosome biogenesis factors
8082955
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Ubie_methyltran
RsmF-B_ferredox
FtsJ
PCMT
Methyltransf_31
Methyltransf_4
ASPP2-like_RA
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
8082955
NCBI-ProteinID:
XP_021314159
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All DBs
Position
4:7880598..7887396
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AA seq
497 aa
AA seq
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MPPPPHQPKNRSRGPAPTGENRRPQRRMASRDAAERAAFFARREAAAVLRRVLRGDATRR
AAGSIKSLVYSPTVRNKRATFALVCQTLKYLSILKEVLTSSGILNSKWKKQEELVYVTTY
DILFGQGIAVSGSVEQLIMQQKDSLRTTLDKVCARRKVSCAEDLLGNKTAVKPKPRFLRV
NTLKITTESVIEELNKIHMVDKDDMIPDMLVLPPGTDLHNHPLVTDGKVFLQGRASCMVA
VALSPKPGWKVIDACAAPGNKTVHLAALMNGKGSIIACELNKERAKTLQHTVRRSGANNI
QIVNGDFLEVDRNDPSYAEVRAILLDPSCSGSGISTERLDYLLPSHSRDNQDDASTSSRV
MKLSAFQKKALSHALSFPSVERVVYSTCSIHQAENEDVVNSVLPLATSLGFELATPFPQW
HRRGLPVFQGSEHLLRTDPEDGLEGFFIALFVRKEVGGTSEEPSEDATVEVRTKRVPGRR
NGVRAFSSLRLSRMILW
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccaccgcaccagcctaagaatcgtagccgtggtcccgcgcccaccggagag
aaccggcggccccagcgtcggatggcgagccgggacgcggcggagcgggccgcgttcttc
gcgcggcgagaggcagcagctgtgctccggcgcgtgctccgcggggatgccaccaggcgc
gccgcgggctccataaaatcccttgtctactccccaaccgtccgaaacaagcgcgccacc
ttcgctctcgtctgccagaccctcaagtatctatcaattcttaaagaggttttaacatcg
agtggaatactgaacagcaaatggaagaaacaggaggaattggtttatgtgactacctat
gacattctctttggtcagggaattgcagtttctggatcagtcgagcaattaattatgcaa
caaaaagattctctcaggactactcttgataaagtttgcgctagaaggaaagtcagctgt
gctgaagacctattgggcaataaaacagccgtcaaaccaaagccccgatttcttcgtgtt
aacacactcaagatcactacagagtctgtcattgaagaattgaacaaaatacacatggtt
gacaaagatgatatgattccagacatgttggtactcccacctggaactgatttgcataac
catccgttggttacagatgggaaagtgtttttgcaggggagagctagttgtatggtagca
gttgcattgtcccctaagccaggctggaaggttattgatgcatgtgcggctccagggaac
aaaacagtccaccttgctgcactcatgaatggaaagggaagtattatagcttgcgaactt
aacaaagagagggccaagacattgcaacatactgtcagaagatctggagcaaataatatt
caaatagttaatggtgactttctggaagtagatagaaatgatccatcatatgctgaggtc
cgtgctattctattggacccctcgtgctctggttctggaatatctacagagagactcgat
tatttgcttccttcacattctagagataatcaggatgacgcgagtacaagctcaagggtc
atgaaactctccgctttccagaagaaagctctctcccatgctctatcatttccctctgtg
gagagagtggtctacagcacttgctcaatccaccaggcagagaacgaggatgtcgtgaac
tccgtcctgcccttagctacatcccttggatttgagcttgccacaccattccctcagtgg
caccgccgcggccttccagttttccaaggatctgaacatttgcttcggacggaccctgag
gatggcctggagggcttcttcattgcattgttcgtcagaaaagaagtgggtggtacttca
gaagagcctagcgaagatgccacggtagaagtaagaacaaaacgagtgcccggaaggcga
aatggggtaagggcgttcagctccttgaggttgtccaggatgatcctctggtga
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