Sorghum bicolor (sorghum): 8083053
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Entry
8083053 CDS
T01086
Name
(RefSeq) actin cytoskeleton-regulatory complex protein PAN1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8083053
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
8083053
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
ALIX_LYPXL_bnd
Baculo_F
Motif
Other DBs
NCBI-GeneID:
8083053
NCBI-ProteinID:
XP_002450196
UniProt:
C5Y3Z1
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Position
5:complement(1977754..1985780)
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AA seq
592 aa
AA seq
DB search
MAGAKADVDAETGDGGGAGGGSSGGSFSEQRLIDKLNRLNNSATSIQTLSQWCIFHRKRA
KRVVDTWEKQFTIAREDKKISFLYLSNDILQNSKRKGADYVDEFWRVLPRSLKHVYEKGG
EEGKKQVARLILIWDDRKVFGSRIESMKNDILGDDPPILVNNGNSLNPSSNPTSNSKAAR
KDSGTIVKKLVVGGMPEKIVSAYQSVLDRHFDEDTALNKCKTTVGLLERIDKDINDASIN
GNQPASSLISDLQEQEMTLKQCIEQLESVDMARVSLINQLKEALSEQESKSVVLRGQLQV
AQAEAQRVIQLREQLGRALVTSVTQSTSSQLMITPPEQTSAIMQGSGVRSTPLQSQPLNP
ATSLPPTVSAVGDESKRTAAAMADKLASLSAPVQVLTSILSSFAAEQAASINGGSPSGEF
SGGPPGFQVDKRPRLEKTGQAADMGAPPFFGQAPQVQQQIGAVPTSLGGTHPPTPGPFPP
PPPPLPSLLSPLMQPFGQNTGGMIGMGGPFGMMAGSMPPPPPLTNILPSGFPGPSGPPPP
PPLPPAQSQAQQQQQSPQAPQQSPTSAGFFQSSGMGFFPPVQLQQSPSAQRQ
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcgaaggcggatgtagacgcggaaacgggagacggcggcggggctggaggt
ggcagcagcggcggctccttcagcgagcagaggctgattgataagctcaacaggctcaac
aactcagccactagcattcaaaccctttcacaatggtgcatttttcaccgcaagagggcc
aaaagggttgtagacacatgggaaaagcagtttactattgcaagggaggataagaaaatt
tcgttcctatatctatcaaatgatatcctgcaaaacagcaaacgtaagggagcagactat
gtggatgaattctggagggttttacctagatcactgaagcatgtctatgagaaaggcgga
gaagaagggaagaagcaggtggcgagattgatattaatctgggatgatcgtaaagttttt
gggagccgtattgaaagtatgaaaaatgacattcttggtgacgaccctcccatattggtt
aacaatgggaatagtttaaatcctagctctaatcccacttcaaattccaaagctgcacgg
aaggattccggtacaatagtaaaaaaactcgttgttggcgggatgcctgaaaaaattgtg
tctgcatatcaatcagtgcttgatcgccattttgacgaagacacagctttaaataaatgt
aagactactgtggggcttttggagaggatagataaagatattaacgatgctagcatcaac
ggtaatcagccagcatcgtcattgatctctgacctgcaagaacaggaaatgaccctaaaa
cagtgcattgaacaactcgaaagtgtagatatggcaagggtatccctgatcaatcaattg
aaagaagctctcagcgaacaggagtcgaagtcagtagttcttcgcggtcaattgcaagtt
gctcaagcagaggctcaacgtgtcatccaacttagagaacaactgggccgtgcccttgtc
acgagcgttacacaatcaacttctagtcaactcatgattactccaccagagcaaacttcg
gctataatgcagggttcaggagtaagatcgacacctctccagtcacagccactgaatcct
gcaacttcacttccccctacagtcagtgcagtgggtgatgagtccaagagaacggcagca
gctatggcagataagcttgcgtctttgtcagcacctgtgcaggtgctgacctccattctc
tcatcttttgctgctgagcaagctgcttccataaatggcggatcgccttctggagaattc
tctggaggaccaccaggtttccaggttgataagaggcctaggcttgagaaaacagggcag
gctgctgacatgggtgctcctcccttttttggacaagcaccacaggtgcaacaacagatt
ggagcagtgcctacttctcttggaggcacacatccaccaactccaggcccattcccaccc
cctccaccaccattgccatctctattgtcaccgctcatgcaaccgtttggtcaaaatact
ggaggaatgattggaatgggaggaccttttgggatgatggctggctctatgccacctccg
ccgccattgacaaacattttgccatcaggttttccaggaccaagtggaccacctcctcca
cctccacttccaccagctcagagccaggcccaacagcagcagcagtctcctcaggcgcca
cagcaatcaccaacatcagctggattctttcaatcatcaggcatggggttctttccgcct
gtgcagctgcagcaatctccgtctgcccaacgacagtga
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