Sorghum bicolor (sorghum): 8083054
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Entry
8083054 CDS
T01086
Name
(RefSeq) non-structural maintenance of chromosomes element 1 homolog
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8083054
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8083054
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8083054
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Atypical E3
8083054
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
8083054
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
SLX1_C
DUF8594
zf-HC5HC2H
DUF5968
zf-RING_2
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
8083054
NCBI-ProteinID:
XP_021316684
LinkDB
All DBs
Position
5:1990784..1993574
Genome browser
AA seq
356 aa
AA seq
DB search
MAPLSWRHHTLLQALLTRGPLSDRDFRAVFAAVSGKKPATHQQLFNDTLLKLNKELAYLQ
FELRACMNQYDGVVYYGVVNNIVDDESKLGTKYSVPQVAYYKGLLEAFIQEAGNDGSITS
IDALHVRLDNQVIILDGGSHDSQSRLPSCITDFKLSQKEKTIDELVWDRWLSYTSTGKIG
LGIRSFLDLRGWFRANDIPLCVVCNEACIKATSCPNEGCNIRIHEYCLKKKFSQRKASRA
CPGCGTEWPRQEGEVDGDDDANEPGEDGTASANRSLRKRRKGVKAELVEDRSSRKRRKGV
KAELVEDIHNAGPLTAAVPRRSRSMRRVKAEAVEATQEVLSAGPSKAARASKGRKK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctatcgtggcggcaccacaccctgctgcaggcgctgctcacgcggggcccg
ctctcggaccgcgacttccgcgccgtcttcgccgccgtctccggcaagaaacccgctacc
catcagcagctgttcaatgatacacttctcaagctcaacaaggagttagcatacctgcag
tttgagttgcgagcatgcatgaaccagtatgatggagtggtgtactatggagtagtaaat
aacattgtcgatgacgaatcaaagctcggaacaaagtattctgtgccacaagttgcatac
tacaaagggctgttagaagcatttattcaggaagctggaaatgatgggagcataaccagt
attgatgctctccatgtgcggcttgacaaccaggtcataattttagatggaggttcacat
gacagccaatctcgccttccatcttgcattacggacttcaaactgagccagaaagagaaa
actattgatgaactggtatgggatcgatggctatcatacacctccacaggcaagattggt
ctaggcatcagatcatttcttgatcttcgaggctggttccgtgcgaatgatatcccattg
tgcgttgtctgcaatgaagcttgtatcaaggctacaagttgccctaatgagggatgcaac
ataagaattcatgagtactgtttgaagaagaaattctcccagcgaaaggcttcaagagcc
tgtcctggctgtggcactgaatggccccgtcaggaaggcgaagtcgatggtgacgatgat
gcaaacgagcctggtgaagatggaactgcatcagccaaccgttctttgaggaagagacgc
aagggagtgaaagctgaactggtggaggatcgttcttcgaggaagagacgcaagggagtg
aaagctgaactggtggaagatattcacaatgcagggccattaacggcggcggttcctagg
aggtcgaggagcatgagaagagtgaaagccgaagcagtcgaagccactcaagaggtgttg
tctgcagggccttccaaggcggccagagcttccaaaggaaggaagaagtga
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