Sorghum bicolor (sorghum): 8083064
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Entry
8083064 CDS
T01086
Name
(RefSeq) rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
8083064
Enzymes [BR:
sbi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
8083064
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
8083064
NCBI-ProteinID:
XP_021316364
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Position
5:complement(2155218..2162158)
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AA seq
679 aa
AA seq
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MATAAIVLLVAVGAPTVLHRAAAAVPPPDAAQHHGVTVSVNQHQVIVDNGVVQVTLSTPQ
GHITNIRYNGEQNLLYYTDGANTAGYWDVLWDYPGSGRPAMLNMLDGSELRVVSSSEEKV
ELSFRSNYNPSLPNSVRLNIDKRFVMLKGSSGFYCYAILEHVGGYPALTVDEARITFKLN
PAMFNYMAISDDIQRYMPSIEDRDAPRGTTLAYKEAVLLVDPVEPQFKGEVDDKYQYSLD
NKDNAVHGWISGGGGRSNPAMGFWVITPSNEFKTGGPMKRELTSHVGPTSMAVFLGTHYT
GIDIMLNLGDGEYWKKVLGPVFIYLNSNPNNGSNIRGLWDDAKAQARAEAGKWPYSFPES
PDFAKAGDRGTVTGALLVRDAFASKGGDDDDVPAATAFVGLAAPGGEPGSWATQCKGYQF
WTRATTTGRFSIGGVRAGTYSLYAWVPGFLGDYVKTSTVTVAAGGAVVDLGNLVFVPPRS
GPTLWEIGVPDRTAAEFFVPDADPRYTSKLFVGKDRYRQYGLWERYAELHPPGNDLVFTV
GQSDYSKDWFFAHVTRMIGNVSTPTTRQIRFNLDHLVVNGTYTLRIALAAAQMSRLTVRV
NGRTTREAVFSTPEFGEGNAIARHGIHGGVQWSFEFPIRGYLLRQGGENSISITQTMAFG
PFLGVMYDYLRLEGPPPPA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcagccatcgtcctgctcgtcgccgttggagcgccgaccgtactacaccgg
gccgccgccgcagtgccaccgccggacgcagcccagcatcatggtgtcacagtaagcgtc
aaccaacaccaggtaattgtggacaacggcgtggtgcaggtgacgctgtcaacgccgcag
ggacacatcaccaacatccgctacaacggcgagcaaaaccttctgtactacactgacggg
gccaatactgcagggtattgggacgtgctctgggactatcccggatcaggtcggccagca
atgctcaacatgttggacggttcagagttaagggtagtatcctcaagcgaagagaaagtg
gagctttctttcaggagcaactataatccgtcgctcccaaacagcgtcaggctaaacatc
gataagaggtttgtgatgctgaaaggcagctctggtttctactgctacgccatcttggag
cacgtcggcggctatcctgctctcaccgtcgacgaggctcggatcaccttcaagctcaac
ccagccatgttcaactacatggcgatctcagacgacatacagaggtacatgcccagcata
gaagacagagacgcgccacgtggcactacgctggcctacaaggaggccgtcctgctggtg
gaccccgtggagccgcagttcaagggggaggtggacgacaagtaccagtactcgctggac
aacaaggacaacgccgtccatggctggatcagcggcggcggaggccgcagcaacccggcc
atgggcttctgggtcatcacacccagcaatgagttcaagactggcggccccatgaagcgg
gaactcacctcccacgtcggacccacctccatggctgtgtttctagggacgcattacact
gggatcgacataatgctgaacctgggcgacggcgagtactggaagaaggtgctgggcccg
gtgttcatctacctcaactccaaccccaacaatggcagcaacatccggggtctctgggac
gacgccaaggcacaggctcgagcagaagccggcaagtggccgtacagcttcccggagtca
ccggacttcgccaaggcgggcgacaggggcacggtcaccggcgctctccttgtcagggac
gcgttcgcgagcaagggcggcgacgacgacgacgtgcctgctgcaacggcgttcgtcggg
ctcgccgcgcccggcggggagcctggctcctgggcgacgcagtgcaaggggtaccagttc
tggacgagggcgacgaccaccggccggttcagcatcggcggcgtccgggctggaacgtac
agcctctacgcgtgggttccggggttcctcggagactacgtgaagacctccacggtgacg
gtggcggcaggcggcgccgtcgtggaccttggcaacctcgtgttcgtgccgccgaggtcg
ggcccgacgctgtgggagatcggcgtcccggaccggacggcggcggagttcttcgtcccc
gacgccgaccccagatacaccagcaagctcttcgtggggaaagataggtacaggcagtac
ggcctgtgggagaggtacgccgagctgcaccctcctggaaatgacctcgttttcacggtt
ggtcagagcgactactccaaggactggttcttcgcccatgtcacaaggatgattggcaac
gtgagtacaccgacgacacggcagatacgcttcaacctcgaccacctcgtggtaaacggc
acctacactctgcgcattgcgcttgcagctgctcagatgtccagactcacggtgcgcgtg
aacggcagaacgactagggaagccgtgttcagcacgccggagttcggcgagggcaacgcc
atcgcgcggcacggcatccacggcggcgtgcagtggagcttcgagttccccatcaggggc
tacctgctgcggcaaggcggcgagaacagcatcagcatcacccagacgatggcgttcggg
cccttcttgggggtcatgtacgactacctcaggctggaagggcctccgccgccggcatga
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