Sorghum bicolor (sorghum): 8083080
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Entry
8083080 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8083080
KO
K17925
sorting nexin-13
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbi04990
]
8083080
Domain-containing proteins not elsewhere classified [BR:
sbi04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
8083080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
8083080
NCBI-ProteinID:
XP_021316965
LinkDB
All DBs
Position
5:complement(4297106..4308379)
Genome browser
AA seq
1030 aa
AA seq
DB search
MRKRMESVDDLIEEAKLRTVWWALCIFAISYILTHTSKSMWTNVPMSILILAFLRYLSFK
VEFRWREQPVRKQTYLSQASKRQLSANDHRLSTVPPVSRWRRKVGSPSVEAAFESFIENI
LRDFVLDLWYSDITPDREAPELIRGLVLHALGEVSSRVKEMNLVDMLTRDMADLIGNHLD
IFRKNQTLIGVDVMRTLSSEERDERLKQHLIVSQELHPALLSSEHEYKVLQEIVGGIMAL
VLRPQDAQSPLVRCFSRELMTCLVLQPVMNFASPVYINELIVYLLNNKDTGNVGGNTNMA
NTELVPYKGGSQGCQTESRNLTVEPSSLVPPTNSGMRSLVTSECGKSKVSEDDNDSTIQP
RQPDWAVVLDAATKRRSEVLAPENLENMWAIGRNYQKKMIKVDQSSRLKGSGGSDNSPSA
GAVAKELSSNFNERIASVDDKYMVNLMQSKNRNAQSTFVTGSHPLALQNTNEVKPKEGSQ
VHFSSKEKPHETSNSVKAQLKRSNSTPDIEKIYLAKSNQPMVTSERLNVRKNQDERGAGP
ASHVEVLMHVPKIRCRVVGAYFEKLGSKSFAVYSIAVTDADNKAWFVKRRYRNFERLHRQ
LKEIPNYSLHLPPKSFLSSSVDDYLVHQRCILLDKYLQDLLSIANIAEQHEVWDFLSASS
KNYSAGKSTSVMKTLAVNVDDAMDDIVRQFKGVSDGLKRAVGTSPSSATAQFEDNRMSLS
WNQEEKDNHNLHQRSLESAHSLSDGDSNNEDHTSSVNSGCHSDNEVNNRGHTLNDVKHIE
THSSLDKQASDQIGKPTRAYSDSSNMLSLNTFEDATGIPPEWMPTNVSVPLLNLVDKVFQ
LKRRGWIRRQVLWISKQILQLVMEDAIDEWIIRQINWLRREDAIVQGIRWIQDTLWPNGI
FFTKLDGYKGNAGTCQFDKQSFGSPNQAVGNKKSTSSFELQLEASRNASEVKKLLLDGTP
STLVSIIGYKQYRRSARDMYYFLQSNVCIKQLAYAMLEQVLVTVFPELRQLIDDIHEKGR
KEQASFTYQL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagaggatggagagcgtcgacgatctgatcgaggaggccaagctgcgcaccgtc
tggtgggcgctctgcatcttcgccatctcctacatactcacacatacaagtaaatcaatg
tggacaaatgtgcccatgtcaatccttatacttgcatttctccgctatctctcattcaaa
gtggagttccgttggagggaacagcctgtacgtaagcagacatatttgtctcaagcctca
aagaggcagttgtctgcaaatgatcatcgcctttcgactgtaccaccagtctccagatgg
agaaggaaagttggttcaccttctgttgaggctgcttttgaaagtttcattgagaatatt
ttgcgagactttgttttagacttgtggtattcagatattactcccgacagagaggcccca
gaactgatacgtggcttagtacttcacgctcttggtgaagtatcaagcagggtgaaagag
atgaatctagttgacatgctaacaagggatatggctgatttgattggtaatcatttagat
atttttcggaaaaaccaaactctaattggtgttgatgtcatgaggactttgtcttcagag
gaaagagatgagagactgaagcagcacctaatagtttcacaggaacttcatccagcactg
ttatcttcagagcatgagtacaaggttcttcaagaaatcgttgggggcattatggctcta
gttttgagaccacaagatgcacaaagtccactagttcgctgtttctccagggaactgatg
acctgcctagtcttgcagcctgttatgaacttcgcaagccctgtctacatcaacgagttg
attgtctaccttctaaacaacaaagatacaggtaatgttggaggaaatacaaacatggct
aatacggaactagtgccttacaaaggaggttcacaaggttgtcaaacggaatcaaggaat
ttgactgtagaacctagcagcttagttccaccaactaattctgggatgaggtcacttgtt
acttctgaatgtggaaagtcgaaggtgtcagaggatgacaatgacagtaccatccaacct
cgtcagccagactgggctgtggtattggacgcagctactaaaaggaggtcagaggttctt
gcccctgagaatcttgagaacatgtgggcaatcggaagaaattatcaaaagaaaatgatt
aaagtagaccaatcatctaggttgaaaggttctggaggttcagataacagtccaagtgca
ggggcagtggctaaagagctatcctctaacttcaacgagagaattgcatctgttgatgat
aaatacatggtcaatttgatgcaaagtaaaaataggaatgctcaatctactttcgtcaca
ggtagtcatccacttgctctacaaaacacaaatgaagtgaaaccaaaagaggggagtcaa
gttcatttcagcagcaaggagaaaccacatgaaaccagcaacagtgtaaaagctcaacta
aaacgatctaatagtactcctgatattgagaaaatatatttggcaaaaagtaaccagccc
atggttaccagtgaaaggctaaatgtgaggaaaaatcaggatgagagaggtgctggtcct
gcctcacatgttgaggtgctaatgcatgttccgaagataagatgccgggttgttggtgca
tattttgagaaactaggttcaaaatcttttgcagtttattctatcgcggtgactgatgcg
gataacaaggcctggtttgtgaaaagaagataccggaattttgaacgtcttcatcgacaa
ctgaaggagatacctaattattcattacatctgcctccaaagagttttctttcatctagt
gttgatgattaccttgtgcaccaacgatgcattctcctggacaaatatcttcaagatctc
ttgtctatagctaatattgcagaacagcatgaagtttgggatttcctgagtgcatcctca
aagaattactccgctggaaagtccacctctgttatgaaaaccttggctgttaatgtggat
gatgcaatggatgacattgttcgacaatttaaaggagtttcagatggtttgaaacgggcg
gtcggcacatcaccttctagcgcaactgcccagtttgaagataataggatgtctctatct
tggaaccaggaagagaaagataaccacaacttgcatcaaagaagcttggaaagtgctcat
agcctttcagatggtgatagtaacaacgaagatcacacctcatctgtgaatagtggatgc
cattcagacaatgaggtcaataatagaggccatactttaaatgatgttaagcacatcgaa
acacactccagtttggataaacaagccagtgaccaaataggaaaacctacaagggcatat
tctgattcttcaaacatgttatctctaaatacattcgaggatgcaacaggaattcctcct
gagtggatgccaacaaatgttagtgtgcctttattgaacctggttgacaaggtattccag
ctgaagcgacggggctggatacggaggcaggttctttggatatcaaaacaaattttgcaa
ttggtcatggaagatgcaatcgatgaatggatcataagacaaatcaattggctacgaaga
gaagatgccatcgtacaaggaatacgttggattcaagataccctttggccaaacggtata
ttcttcaccaagttggatggatataaagggaatgcaggcacatgtcaatttgacaagcag
tcatttgggagtcccaaccaggctgttggcaacaaaaagagcacaagctcttttgaactt
cagcttgaggcatccagaaatgccagtgaggtcaaaaaacttcttttagatggaactcca
tctaccttggtcagcataattggatacaagcagtaccgacgcagtgcaagggacatgtac
tacttcctccaatccaatgtctgcatcaagcagctcgcatatgcaatgctagagcaggtc
ctcgtgacagtcttcccagagcttcgccagctaatagacgacatacatgagaaggggcgc
aaagagcaagcctcattcacataccaactctga
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