Sorghum bicolor (sorghum): 8083087
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Entry
8083087 CDS
T01086
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
8083087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8083087
03029 Mitochondrial biogenesis [BR:
sbi03029
]
8083087
Membrane trafficking [BR:
sbi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
8083087
Atg1 complex
8083087
Mitochondrial biogenesis [BR:
sbi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
8083087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
8083087
NCBI-ProteinID:
XP_002450329
UniProt:
C5Y565
A0A921QXW5
LinkDB
All DBs
Position
5:complement(4453778..4459661)
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AA seq
610 aa
AA seq
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MAAAAAAAAGGVSEPPMVEQVITEFFAKSLHIILESRSPYDSSRNFTRPSPPSSPLAGSQ
PRDRWFNLALRDCPAALENFDLWRQSNLELLVIDIVLVQRDNTRTASVGASRIIERWVIK
YETSRSGNAIKNSGKKARSSSSQDHSLYRRAYSGSTVLFRSLYLVVRLLPAYHLFQGLNS
SGRICPLSLSHKISSFVEPFTRAEDAEMKHYAFAPIETLFGSLSLSVSYVPVLELAAVPE
QPTPVPPELIKDYVGSPTTDFLRKLDSLPSDGIAPACFPVTRRHSWSTGHGVRTSVSPFP
MSSEPHGRLEPRMPTDNSPTAYSHPHNTSSSGKKRNTVNEECYPSPPLSPSPSHSPSSYP
RNPFFRYESAPLSIPTAMAGGGGSRLPPSPRRKDKQQCSSQNENLTHSPNDKSIVSKDLV
KLSEFQNEKSLQKVLSFGNDDLVYFRGLKLTRTSSKLFIMDELDERELVFAWEDKDTIID
QLRRIDISDRDDQGPSQEGGSLTRSPDAAIGILMRILQNAPGLRERLLLPGPSAPVPQEP
SLQRVVTEEHGSSASSSTGVPSVLLRSRTAADALEELNKYKEIRESILNRSKGHSCSTKL
LEEKPADGDP
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccgccgccgccgctgctggcggcgtgtcggaaccgccgatggtggagcaa
gtgatcaccgaattcttcgccaagagcctgcacatcatcctggagtcacgctcgccctat
gattcgtcgcggaacttcactcggccctccccgccatcgtcgccgctggctggaagccag
ccgcgggaccggtggttcaaccttgctctccgggactgccctgctgcgctcgagaatttc
gacctgtggaggcagagcaacctcgagcttctggtcattgacattgtccttgtgcaacgt
gacaataccagaaccgccagtgtcggggccagcaggatcattgagaggtgggtaataaag
tatgaaactagcaggtctggcaatgctatcaagaacagtggcaagaaagctagaagcagc
tcttctcaggatcatagcttgtacaggagggcatacagcggctccacagtgttgttccgg
tcattgtacctggttgtcaggctcttgccagcataccatctcttccaggggctcaattcg
tctggaaggatctgtccgctgagcctctcgcacaagatttcatcatttgttgagccattc
acccgcgctgaggatgcagagatgaaacactatgcatttgctccgattgaaactctgttt
ggttccttaagcttgtctgtttcgtatgtgccagtgctggagttggctgcagtaccagag
caacccacaccggtgccacctgagcttataaaggattatgttggaagccccacaacagat
tttcttaggaagctcgattccctgccttcagatggcattgcacctgcatgttttccagtg
accaggcggcacagttggagcaccgggcatggagttagaacatcggtatcgccatttccg
atgagttcagaaccccatggacgcctagagccacgtatgccgaccgataattctccgaca
gcatactcacatccacataacacatcatcgtctgggaagaagagaaatacagtaaatgaa
gagtgctatccatcaccacctctgtcgccatcaccatcccattcgccttctagctaccca
agaaatcctttcttccgatatgagagtgctcctttaagtattcccacagcgatggctggt
ggaggtggtagcaggctgcctccttctccacgtaggaaggataagcaacaatgctcatct
caaaatgagaatctgacacattctccaaatgataaatcaatagtatcaaaggatttggtc
aagcttagtgagtttcagaatgagaagtctttgcaaaaggttttatcttttggcaatgat
gatttggtgtattttcgtgggctaaagttgactcgtacctccagtaaacttttcatcatg
gatgaactggatgaacgggagttagtttttgcatgggaagataaagacaccatcattgat
cagcttagaaggatcgacatatctgacagggatgaccaaggaccatctcaggaaggaggc
tcattaacgaggtctccagatgcagcaattggtattcttatgcgcatcctacagaatgcc
cctggcctcagggaaaggctactactgccaggccctagtgccccggttcctcaagaacct
tcactccagagggtagtgaccgaggaacatggcagcagtgcatcaagctctacaggggtg
ccttccgttcttctgaggtcaaggacagcggcggatgcgctggaggagctgaacaagtac
aaagagattagagaatcgatactgaaccgcagcaaagggcattcctgcagcaccaagctg
ctggaggagaaacccgcggatggagatccatag
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