Sorghum bicolor (sorghum): 8083422
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Entry
8083422 CDS
T01086
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbi01009
]
8083422
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8083422
Protein phosphatases and associated proteins [BR:
sbi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
8083422
Membrane trafficking [BR:
sbi04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
8083422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Syndetin_C
Vps54_N
LURAP
DUF7791
Motif
Other DBs
NCBI-GeneID:
8083422
NCBI-ProteinID:
XP_002447501
UniProt:
C5YCN0
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All DBs
Position
6:complement(3828188..3840347)
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AA seq
987 aa
AA seq
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MASRPPLRTTSVASVSSSTDSPTSTGPPGGVPQSITALLNNPLPSAAASSYSWLPWPPPT
ITLPDAAPPPPSHPCEVTRADFAPYLAAVSDPFARFADIRLHASAELAASSDAEGAPAAS
SGLAACLREVPALFFKEDFALEDGPTFQAACPLDDDALQERLGQHLDVVEAHLVREIALR
SESFYEAQGRLRGLDGEIVTAVGRIRELREVVRVLTGDLVGAARQVQELNATRGNLVALQ
QKLTVILYVSQALTALKLLVAAADCAGALDVIDDLQNLLDTDELAGLYCFRHIRDQLGTS
LDSVNSILSAEFVHAAVPDGKAVDAMILSTVKRKASSPLNGTDHEGNVDEEESFILRDRL
LPLIICLLRTDKLPAVLRIYRDTLITVMKASIKATVAELLPVLTARPIDSDSVTGDRATD
ADAGGQSLANKLRSLSSEGFVQLLSAIFRIVQVHLQQAAEVKRIVEWIMGNLDGTLSGDS
SNSTLQHGGSVISDTQENDSSRGSNTITRSTSKIPFVQGKTNDFSIINSIKNVRADVLRE
NTEAVFAACDAAHGRWAKLLGVRAALHPRLRLQEFLIIYNITEEFIAATEKIGGRLGYNI
RGILQQQSKQFVDYQHNVRMTKIKAVLDQETWVAVDVPEEFQAIVLSLSSTYSSVNGMEM
PSPDDNLKFSDHRPTSQELTYSAENNADNGKVTSTGESKVESTSQTENNVAGNLKSTLQT
IVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSLEVVQRVVEILKLFNTRTCQLVLGA
GAMQVSGLKSITSKHLALASQIISFIHSLIPDIRRVLFLKIPEARKQLLMSELDRVAQDY
KVHRDEIHSKLVQIMRERLLANLRKLPQIVEGWNGPEDNDVQPSPFAKAVTKEVTYLHRI
LSQTLLEVDVQIIFRQVVQIFHSHITEAFSKLEVSTPQAKNRLCRDVQHILACIRKLPAE
NFSSETIPNYGLLDEFLAENFGTKVGE
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcgcccgccgctccgcaccacctccgtcgcctccgtttcctcctccaccgac
tcccccacctccaccggcccccccggcggcgtcccgcagtccatcaccgcgctcctcaac
aatccgctcccctccgccgctgcctcctcctactcctggttgccctggccgccccccacc
atcacgctacccgacgcggctccaccgccgccgtcgcacccctgcgaggtcacccgcgcc
gacttcgcgccctaccttgccgccgtctccgaccccttcgcgcgctttgccgacatccgc
ctccacgccagcgccgagcttgccgcctcctctgacgccgagggcgcccccgcggcctcc
tctggcctcgccgcctgcctccgcgaggtgcccgcgctcttcttcaaggaggacttcgcg
ctcgaagacgggcccaccttccaggccgcctgcccgctcgacgacgacgcgctgcaggag
cgcctcggacagcacctcgacgtcgttgaggcccaccttgtgcgggagatagcactccgg
tctgagtccttctacgaggctcagggtcggctgcgcgggcttgatggggagatcgtcacg
gcggtagggaggatccgcgagctcagggaggtggtacgggttctcacgggggacctcgtc
ggggcagcaaggcaggtgcaagagctcaatgctacccgaggcaacctggtggcgctgcag
cagaagctcactgtcatcctctatgtcagccaggcgcttactgcactcaagttgcttgtt
gcagcagcagattgtgctggtgccctcgatgtcattgatgacttgcaaaatttgctagac
actgatgaacttgctgggctttattgctttcggcatatccgagatcagctgggaacatca
ctagattcagtgaacagcattctttcagcagaatttgtgcatgctgctgttcctgatgga
aaagctgtagatgctatgattttatcaactgtgaaaagaaaggcttccagtccattgaat
gggacagaccatgagggtaacgtagacgaggaggaaagttttattctcagggatcgactc
ctccccctcattatttgcctactgagaacggacaaacttcctgcagttcttagaatttac
cgggatacacttataactgttatgaaagcttcaatcaaagccacagtagcagaattactc
ccagttttaaccgccagaccaatagattctgattcagtaactggagacagagctaccgat
gctgacgctggaggccagtccttagcaaataagttgcggagtctttcatctgaaggattt
gttcaacttttatccgccatttttaggatagtacaggtacatttacagcaagcagctgaa
gtgaaaagaatagttgagtggatcatgggaaaccttgatgggactttaagtggtgattct
agtaattctacattacaacatggtggttcagttatttctgatacccaagagaatgactct
tcacggggctctaatactattacacggagtacttccaagatcccatttgtccaaggaaaa
acaaatgatttttccattataaattcaataaagaatgttcgggccgatgtcttgagagaa
aacactgaagcagttttcgcggcttgtgatgctgcccatggacgatgggctaagctatta
ggtgttcgtgctgctttacatcccaggttaaggcttcaagaattcttgatcatctacaac
ataacagaagaatttatagctgctacagaaaagattggaggcaggttgggttacaacatt
cgtggaatcctacagcaacaatcaaagcaatttgttgattatcagcataatgttcggatg
acaaaaatcaaagcagttcttgaccaagagacatgggttgctgtggatgttcctgaagag
tttcaagcaatcgttctttcactttcatccacttattcttctgttaatggcatggagatg
cctagccctgatgataacctaaagttcagtgatcatcggcctacaagtcaagaactgaca
tattcagctgaaaataatgctgataatggcaaagtaacatcgactggtgaaagcaaggtt
gaatccacttctcagactgagaacaatgttgctgggaatctgaagtccaccttgcaaacg
attgtacatggaggtgttggctatcatatggtaaactgtggtttgatactgttgaagatg
ttatccgaatacgttgacatcagtaaatgtttaccatcactatctttggaggtggtccaa
cgtgttgtggaaatattaaagcttttcaacactaggacttgccaacttgttctcggtgca
ggagccatgcaggtgtctggacttaaatcaattacgtctaagcatttagctttggcgagt
caaatcattagttttatacattctttaattccagatatcaggcgagtccttttcctgaaa
atacctgaagcacgcaaacagctgttaatgtctgagctggatagagtagctcaggactac
aaggtccatcgagatgaaattcacagcaaactcgtccagataatgagagagaggttgctt
gcaaatcttagaaaattaccccaaattgtggaaggctggaatggcccagaagataatgat
gtgcagccaagtccatttgctaaagctgttacaaaggaagttacatatttgcatcgcatc
ctttctcaaacattgcttgaggttgacgtgcaaataatattcaggcaagtggttcaaata
ttccattcacatattacagaagcattttcaaaattggaagttagtactcctcaggcaaag
aatagattatgccgagatgttcagcatattcttgcatgcatccggaagttaccagctgag
aacttcagttcagaaactattccaaattatggtcttcttgatgaattcttggctgagaac
ttcgggacaaaagttggtgaatga
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