Sorghum bicolor (sorghum): 8083658
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Entry
8083658 CDS
T01086
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8083658
Enzymes [BR:
sbi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
8083658
Transfer RNA biogenesis [BR:
sbi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
8083658
Prokaryotic type
8083658
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
8083658
NCBI-ProteinID:
XP_002467892
UniProt:
A0A921S417
C5X0R7
LinkDB
All DBs
Position
1:complement(66777893..66782253)
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AA seq
520 aa
AA seq
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MAAAAAAIATASASWLLKRSISSAFLARRAGPSILRTALSYSSSASACPKPAPSLSPPDT
SANDGGGGMRWESARKKRVVLRIGYIGTEYRGLQKQRELGVDSTIESVLESAIFKSGGIL
ESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDN
VRVFSILPAQRSFDVRRECLYREYFYLLPAEVIGIKDGYSPEEIQEHLSEFNSILKGFEG
NHPFHNYTARAKYRKVLAGRHPRAKGASLTLKSMSSEMGMAESSSLESTSSDDDEDLNIS
SIDSGASENIFVNDILKFSESRVQIQARWLHEPDESDRLNASHFRDIITCSCGELQTSSG
IQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPSEVLIL
KDNSFCTKSKEGRIVRPGIQSMNKSAAIRKGVEEFYKAALLPEVAKFLDPAVPPWKEWVE
NLDRFAGISDSQLDEVREAYRAWKADYDRVKMARKSASSV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccgccgccatcgccacggcgtcggcgtcgtggcttctcaagaggtct
atatcctccgctttccttgcgaggcgcgcgggccctagcatcctgcgtacagcccttagc
tattcctcctccgcatccgcctgccccaaaccagcgccgtccctgtctccgcctgacaca
tccgccaatgatggaggcggcgggatgaggtgggagtctgcgcgcaagaagagagtggtg
ctccgcatcggctacataggcaccgaataccgagggcttcaaaagcagcgagagcttggc
gtggattcgaccattgagtcagtcttggaatctgccatcttcaagtcaggtggaattctt
gagagtaattatggaaaactgcaaaaggttgggtgggagaggagtagccgaactgataaa
ggggtacactcactggctacaatgatttcccttaaaatggaaatccctgatagagcgtgg
gaggatgatcctgatggcattgctcttgccagtttcatcaactcaaatttgccggacaat
gtgagggtttttagtatcttgcctgcacaaaggagttttgatgtgaggagggagtgctta
taccgtgagtacttctatcttcttcctgctgaagttattggaatcaaagatggttatagc
cctgaagaaatacaagagcacttgtcagaattcaacagcatactgaaaggcttcgaggga
aaccatccatttcataattacactgcacgtgccaagtacaggaaggttcttgcgggaagg
cacccgagggccaaaggagcaagcttgacgttgaagtccatgtcctctgaaatgggtatg
gcagaaagctcttctttagaaagcacttcttcagatgatgatgaggacttgaatatttca
tcaatcgactctggtgcatcagaaaacatttttgtgaatgatatcctgaaattttctgag
agtcgagtgcagattcaagctaggtggctgcatgaacctgatgaaagtgatagattaaat
gcttcacatttcagagatatcattacctgttcatgtggagagttgcaaacttcatcagga
attcaatttgtggaattgaccatatgtggggtatctttcatgctacaccagatccggaaa
atggttggaactgccgtggcagtgaagcgtggattactacccaaagatatcatagaactg
tctcttgcaaagttttctagaatcgttctaccaatagccccttcagaagttctgatcctt
aaggacaatagtttctgcacaaagagcaaggaagggagaatcgtacgccctgggatccag
tcaatgaacaagtcagcagcaatcaggaagggggttgaggaattctacaaggcagctctt
ctgccagaagtagcgaaattcttggatcctgctgtgccaccatggaaagagtgggtggag
aacttggacaggtttgctggcatatcagattcgcagctggacgaagttagggaggcctac
agagcatggaaggctgattatgaccgcgtgaaaatggctagaaagagtgctagcagtgtc
taa
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