Sorghum bicolor (sorghum): 8083723
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Entry
8083723 CDS
T01086
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
8083723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8083723
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
8083723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
8083723
NCBI-ProteinID:
XP_021314635
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Position
4:complement(63828726..63834002)
Genome browser
AA seq
1278 aa
AA seq
DB search
MIEESGRRVRPVKEEALDDLDCDWVRSAEAKRALVAVLPPGSSHAKRKRKRASSGRAKPD
KRADGGVHALDRNSSASGAGHPTAWMSDDARSSRGVKSRESSRGVAGDRPGSAKKALVSS
EESRGAPGKARSGGGARRERSTSVAPANWIGTSIGSRIRSRSRKQGTGQYSARVSSEDTG
EDEVQEQKQKRVEDVESMDVDDDDDNNTNEAGNGIQKESEQDEALEGRSRQDSHALIDNE
EEVGEKELSEEEEDDNQEESHSMYDGEGEQEEDASEEVEQEMDETGEEDEKELDGTGEED
EQELDGAGKAQPVTPSNTIAGSSMRSGGDDTRVFRRRVFEGICLPQKPRKTVGKGIGART
RSQRKCKDKKLLRRGTFSKPYNIDIPDSTSDSEEDIEPPAPQQGLLSSSEEGNITFGKRK
HRRAIKNRRRKRPSTSSDEEYRVYARDGKDRPFRRLKKGLSKLQAGKEGCGRYVGSNPGH
AKYNGPNGENQSNEQDGIFFKRTAHKIRMKKHGPVAKAAYDELLNSLFSGWEDHINDPDH
AAAGNSLPLVFSFGDEDAEENIENDKYQEDLWRECDIAFESMDIGNGSEEDGLEIPPVEV
TSCNNGQHEFIIDEQIGVRCKHCNVVDIEIRHVLPTLGKFSAERESAIDPELDKMLKEML
SVFEQNDVLVSNGHELPCNFGGHKAGSVWDLIPGVKETMFPHQQDAFEFLWTKLAGGTTI
EQLKQTVKSDVGGGCVISHAPGTGKTRLAITFVQSYLEVFPRCRPVIIAPRGMLATWEKE
FRKWKVKLPFHVLNSTEINWSEDKTIQEQVAKNGTFHRRLLTDKMDQNYRRLVKLGSWMN
GTSIIGLSYSLFRKLANHEGMDGDKVRKLLLEKPGLLVLDEGHTPRNKKSLIWKVLERVS
TEKRIILSGTLFQNNFEELKNTLRLVRTKEADGPKEADAVHLETDEGKDFWSSLRLNDIT
EADINEVRKKLDPIVHIHSGKFLQKSLPGLGESVVILNPLPYQKEVIATMEKTVATTGLD
EEYKISIASIHPSLLASAKLSEQEESILDIPKLESLRSRPSEGVKTRFVLEIVRLCEALN
ERVLVFSQYLGPLSLIMEQLKAKFNWAEGKEILLMSGKVPVKNRQTMMEVFNDMKSKAKV
MLASTKACCEGITLIGASRVVLLDVVWNPSVGRQAIGRAYRIGQEKIVYTYNLIAQGTRE
KSKYDTQAKKEHMSKLLFSKEPEHGECNLPPELTFNDRVLEEMTAREDLKELFVKIYVDN
QTDGSRGEMEKNNTCPQD
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggagagcggccgtcgcgtgaggcccgtcaaggaggaggctctcgacgacttg
gactgcgattgggttcgttcagcggaggcgaagcgcgccttggtggcggttctgcccccc
ggaagctctcacgcgaagaggaagcggaagagagcatcgtccggcagagccaagcccgac
aagcgcgccgacggcggcgttcacgcgttggaccggaattcgagcgcttcaggggctggt
catcccacggcgtggatgtccgacgacgccaggagctccaggggtgtgaagagcagagag
tcaagcagaggagtcgcgggtgaccggccgggttcggccaagaaggccctcgtgtccagc
gaagaatccaggggtgcaccgggaaaagcgaggagtggaggaggtgcgagaagggagagg
agcactagtgtggcaccggcgaactggatcggcaccagcattgggtcgcggatccggtca
aggtcgcggaagcaggggacagggcagtactctgctcgagtgtcgtccgaggatacaggg
gaggacgaagtgcaggagcagaagcagaagagagtggaagatgtggagtccatggacgta
gatgacgacgacgacaacaacaccaatgaggctggcaatggcatacagaaagagagtgag
caggacgaggctttggagggaaggagcaggcaggatagccatgctttgattgataatgag
gaggaggtgggggaaaaggaattgtcggaagaggaggaagatgacaatcaagaagaaagc
catagcatgtacgatggcgaaggtgaacaagaagaggatgcatctgaagaggttgagcag
gaaatggatgaaacaggggaggaggacgaaaaggaactggatggaactggggaggaggac
gaacaggaactggatggagcagggaaggcgcagccagtcacgcctagcaacaccattgca
ggtagcagtatgagatcaggaggcgatgacacacgagtcttcaggaggagggtttttgag
ggcatatgtttgcctcagaagccacgcaagactgttggcaagggcattggagcgaggacg
cgatcacagcgaaaatgcaaggacaaaaaactgctcagacgtggaactttcagtaaaccc
tacaatattgatattccagactcgacctctgattctgaagaagatattgagccaccagcg
ccacagcaaggactgctttcatcaagtgaggaaggcaacataacttttggcaaaaggaag
cacagaagagcaataaaaaacagacggcgcaagagaccgagtaccagtagtgacgaggag
tacagagtatatgctagggacggcaaagataggccttttcggaggctgaagaaggggcta
tccaaacttcaggctggcaaggaaggttgcggaaggtatgttggttcaaatcctgggcat
gccaaatacaatggtccaaatggcgagaaccagtccaatgaacaggatggtattttcttc
aaaagaacggcacataagattcgaatgaagaagcacggtccagtagcgaaagctgcatat
gacgaactccttaattccttgttctctggctgggaggatcatataaatgatcctgatcat
gcagcagctggaaatagtttacctttggtattctcattcggagatgaggatgcagaagag
aatatagaaaacgacaagtatcaagaagacctgtggagggaatgcgacattgcttttgaa
tccatggatattggtaacggctctgaagaggatgggctagaaatacctccagtggaagta
acttcttgcaataatgggcagcatgaattcattattgacgaacaaataggagttcggtgc
aagcattgcaatgttgtcgatatcgaaatccgacatgtactgcctactttggggaaattt
tctgcagaaagggaatcagcaatcgaccctgagttggacaagatgcttaaggaaatgctc
agtgtttttgaacaaaatgatgtgctggtatcaaatggacatgaactaccttgtaatttt
ggtggtcacaaagctggttcagtctgggatctcattcctggagtcaaggaaactatgttc
ccgcaccagcaggatgcatttgagttcttgtggacgaagcttgcaggaggtactacaatt
gaacagctaaagcaaaccgtaaaatctgatgttggaggtggttgtgtgatttctcatgca
cctgggacgggaaagacacgactagcaatcacatttgttcaatcctaccttgaggttttc
ccacgctgtcgcccggttatcattgcccccagggggatgttagcgacatgggagaaggag
ttcaggaaatggaaggtaaagctcccttttcatgtactgaattccactgagatcaactgg
agtgaagacaagaccatccaagaacaggttgccaagaatggaacttttcatcgaaggctg
ctgacagataaaatggatcaaaattataggcgattggtgaagttagggtcctggatgaat
ggtaccagtataatcggtttgagctactcgctttttaggaagctagctaatcatgaaggc
atggacggggataaggtgaggaagctgctgcttgagaaacctggcttgcttgtccttgat
gaagggcacacaccaaggaacaagaagagtcttatctggaaggttcttgaaagggtttcc
actgaaaagagaataattctatcgggcactctattccaaaacaactttgaggagctcaaa
aacaccttgcgccttgtcaggacaaaggaggcagatgggccaaaggaggcagatgcagtg
catctagagacggacgagggcaaagatttctggtcttcattgagactgaatgacatcaca
gaggcagacataaatgaagtgaggaaaaaattggaccctattgtccacattcacagtggc
aaatttcttcagaagtctctcccaggtctgggagaatccgtggtgattctgaaccctctt
ccttatcagaaagaagtcatcgcaactatggagaagactgtggcaacgacgggtcttgat
gaggaatacaaaatctcgattgcatcaatacatccctccctccttgccagtgcaaaattg
tctgaacaagaggaatctatcttggacatacctaagctagagagtttacgctcccgtcca
tctgaaggggttaagacgaggtttgttttggagattgtccgtctgtgtgaagcgctaaat
gaacgggtgctagtgttcagtcaatatcttggaccattgtcgttgatcatggagcagctg
aaagcaaagttcaattgggctgaaggcaaagagatcctgctaatgagtggaaaagttcct
gttaaaaatcgccaaaccatgatggaggtcttcaatgacatgaaaagcaaggccaaggta
atgcttgcatcaacgaaggcatgctgtgaaggcattacacttatcggggcatcacgtgtg
gttctacttgatgttgtgtggaacccctctgttggaaggcaagcgattggccgagcttac
agaattggtcaggaaaagattgtgtacacatacaatctaattgcacaaggaacaagagag
aagagcaaatatgacacacaagctaagaaggagcacatgtctaaattgctcttttcaaaa
gaaccagagcatggagaatgcaacttgcctccagaactgacgttcaatgatagggttttg
gaagaaatgactgcacgtgaagacctcaaagaattgtttgtaaagatttatgttgacaat
caaactgatgggtcacgtggagagatggagaagaacaatacatgtccgcaggactaa
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