Sorghum bicolor (sorghum): 8083817
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Entry
8083817 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8083817
KO
K17925
sorting nexin-13
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbi04990
]
8083817
Domain-containing proteins not elsewhere classified [BR:
sbi04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
8083817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
TRAP-gamma
Motif
Other DBs
NCBI-GeneID:
8083817
NCBI-ProteinID:
XP_021303294
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All DBs
Position
9:58278949..58286598
Genome browser
AA seq
1133 aa
AA seq
DB search
MATTAAGAPRAQTLRDLAEEGKKRAVLLLVFAFGLAFLMSLTSSSVWFNLPCATALIVLF
RYISLDYDLRRKSTTSTDHASHSLVKTKITEVKKVLHQTEKDGKLDWRSKVNSPPVEAAF
EQFTRHLITEWVTDLWYSRVTPDKEGPEELITIVNTVLGEISVRARNVNLINLLIRDLVD
LVCNNLELYHFCQAKIGKEKFVNLPSERRDAELKMILLAENKLHPALFSASAEYKVLKSL
ADGLISITVKPQDLQCTFFRCTARELLACAVLRPVVNLANPRFINERIESLALSHTNKLE
KEVAESLEDATTVKHREPHMPSIDEFSALTDHSSPGVELVRFHQGQSKTASDIQPSNSTN
PYSLKLEPSHASLISSSHPLESTSLASSSHIASDNSFSLHTKSNNRATADGHSRERAQPL
GINSERTHQALALEHLEDMWTKGKNYKSENAKHIKKVSVGSASLGSTSVQQSVPCSTSIC
QNPSNSERQVASSQLEDQHLVRHSTAPTYPNGIPKSLSTEMADHAGPEDFGVESESSYAT
EDDEFNNVTGLDSPVTRVWESKSKGNATLSHIHHPLESPGFHRAKKNRSHVGKLKMSRTS
SGRKRSRSNAQKPPIWQEVERSSFSVGDGMDILNTSANDSKTDELDEDPEVESMARMFSS
SNASSLSLPSSDSSYASNYRGANVLQDSYLKLRCEVVGANIVKSGSGMFAVYSISVTDAN
GNNWSIKRRFRHFEELHRRLKEYAQYNLHLPPKHFLSSGLEVHVVRERCKLLDIYLKNLL
QIPIVSSCIEVWDFLSVDSQTYIFTDSLSVIQTLSVRLDERSNGKNVKALNSSGALNGNL
ISGGQSLHGHTGNTVHKDSDIAGDGLRFRKGNVNKNLGNSVSHTIDSVRDTTANHYQDNS
GSDPEQNDHSFSIDSVNPRKLRSSETNDTSQISESDGFSWMAPNLSVPLFHLVDVVFQLQ
DGGWIRRQAFWVAKQILQLGMGDTFDDWLVDKIQLLRKGRIIAFAVKRVEQILWPDGIFM
TKHPNRKTPPPPPGAQSNGMGNYLSDEQRIEAAHRANFVRELIIDKAPSPLVSLVGRKDY
EKCAQDIYFFLQSPVCLKQLAFELLELLVLSAFPELDGSVRKWHEDKQKFCAE
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacggccgcgggcgcgccgagggcgcagacgctgcgggacctcgcggaggag
gggaagaagcgggccgtcctgctcctcgtcttcgccttcgggctcgccttcctcatgtcc
cttacgagctcatcagtatggtttaacctgccatgtgccacagctctcattgttttgttc
cgctacatatcacttgattatgaccttcgtagaaagagcacaactagcacagatcatgcc
agtcattcacttgtcaaaacgaaaattactgaggtaaagaaggtccttcatcagactgaa
aaggatggaaaattagattggaggagcaaggttaactctcctccagttgaagcagcattt
gaacagttcacaaggcaccttatcacagaatgggtaacagatctttggtactcacgtgta
acacctgacaaggaaggtcccgaggaactcattactatagttaatactgtcctcggggag
atttcagttcgggcaaggaatgttaaccttatcaatctgctgatcagggatttggtcgat
cttgtatgcaataatttggaactttatcatttctgtcaagccaagattggaaaagagaag
tttgtgaaccttccttcagagcgtcgtgatgctgaactgaaaatgatccttctagctgaa
aacaagttgcatccagctttattttcagccagtgctgaatacaaggtattaaaaagtctt
gctgatggattgatctcaatcacagtgaagcctcaggatctacagtgtactttcttccgg
tgtacagcacgagaacttcttgcttgtgcagttttgagacctgttgtgaacttagcaaat
ccaaggtttataaatgaaaggatcgaatccttggctctttcgcatactaataagctggag
aaagaagttgcagaatccttggaggatgcaacaactgttaagcacagggaaccccatatg
ccctctattgatgaattttcggcactaacagatcactcaagtccaggtgttgaactcgtt
cgatttcatcagggtcagtccaaaactgcatcagatatacagcccagtaacagtacaaat
ccatatagtctaaagttagaaccctctcatgcttctttgatcagtagttcacatccactg
gagtcaacaagtttagcttcatcttcccacattgcttcggataatagtttttcattgcat
accaaaagcaacaacagagcaactgcagatggtcacagtagagagcgtgcacagcccttg
ggtatcaactctgagcgaacacatcaagctttagcacttgagcaccttgaggatatgtgg
acaaagggaaagaattacaaatcagaaaatgcaaaacatatcaaaaaggtgtctgttgga
tctgcttctctaggttcgacttcagttcagcaatcagttccttgcagcacttcaatttgt
caaaatcctagtaattctgaaagacaagtagcgtcctctcagttggaggaccagcatttg
gtaagacactcaactgcacctacatatccaaatggcatcccgaaaagcctatctacagaa
atggcagatcatgccggcccagaagactttggagtagagagtgagagttcatatgccact
gaggacgatgaattcaacaatgtgactggacttgattctcctgttaccagagtttgggaa
agcaaaagtaaaggaaatgccaccttatcacatatacatcacccacttgagtctcctggt
ttccatagagcaaagaagaatagaagtcatgtgggaaaactgaaaatgtcaagaacttct
tcaggaagaaaaaggtcaaggtcaaatgctcagaagcctcccatctggcaagaagtggag
agatcctctttctctgttggtgatggtatggacatactaaatacatctgcaaatgattca
aagacggatgagctagacgaggatcctgaggtggaaagtatggctaggatgtttagtagt
tcaaatgcttcatctttatcattgccatcaagtgactcttcatatgcttcaaattatcgt
ggtgccaatgtgctacaagactcttatttgaagttaagatgcgaggtggtaggagctaac
attgtcaaaagtgggtctggcatgtttgctgtgtattctatttccgtgaccgatgccaat
ggtaataattggtccatcaagaggaggtttcgtcattttgaagagctgcatcggcgtcta
aaagagtatgctcagtacaatcttcatttacctccaaagcatttcctctcatcaggttta
gaggttcatgttgtccgagagagatgcaagctgcttgacatatatctgaagaaccttctg
caaattcctattgtttcaagctgcatagaagtctgggattttctgagtgtggattcacag
acatatattttcacagactctctctcagttatccaaacattgtcagtcaggttagatgaa
agatcaaatgggaaaaatgtaaaagcattgaactcttctggagctttgaatgggaattta
atctctggaggtcaatctttgcatggacatacaggcaacactgtacataaggattcagac
attgctggtgatggtttgagatttaggaaagggaatgtgaacaagaacttaggaaacagt
gttagccacacaatagatagtgttagagacacaactgccaatcattatcaggacaattct
ggaagtgatccagagcagaatgatcattctttttcaatagattcagtaaaccctaggaag
ctgcgttcaagtgaaaccaatgacacatctcaaatttcagagtctgatggattctcgtgg
atggccccaaatcttagtgtccccttgtttcatcttgttgatgtggtttttcagctccaa
gatggaggctggataaggcgtcaagcattttgggtagcaaagcaaatactgcaattggga
atgggagacacatttgatgactggcttgttgacaaaatccagttacttaggaaagggagg
ataattgctttcgctgttaagcgtgttgaacaaattctctggcctgatggaattttcatg
acaaaacatccaaatagaaaaacgcctccacctcctcctggtgctcagagcaatggcatg
ggaaactatctaagtgatgaacaacggatagaagctgctcatcgtgcaaattttgttcgt
gaattaataatagataaagccccatctccactagtgagtctggttggtcgaaaggattat
gaaaaatgtgctcaggatatctatttctttcttcagtccccagtttgtttgaagcagcta
gcgtttgaacttcttgagctgcttgttctttccgcatttccggagttggatggctcggtg
aggaagtggcatgaagataaacagaaattctgcgccgagtaa
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