Sorghum bicolor (sorghum): 8083942
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Entry
8083942 CDS
T01086
Name
(RefSeq) protein HIRA
KO
K11293
protein HIRA/HIR1
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbi03036
]
8083942
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
8083942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
8083942
NCBI-ProteinID:
XP_002463803
UniProt:
C5WZ41
A0A921RWN0
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All DBs
Position
1:5432617..5442362
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AA seq
959 aa
AA seq
DB search
MITEKPSWIRHEGLQIFSIDIQPGGLRFATGGGDQKVRIWSMKSVDKNNANNDSSQGLLA
TMRDHFGSVNCVRWARHGRYLASGSDDQVILIHERKAGSGTSEFGSGEPPDVENWKVVMT
LRGHTADVVDLNWSPDDSTLASGSLDNTVHIWNMTNGMCTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKSVIIWRTSDWSLAHKTEGHWEKSLGSTFFRRLAWSPCGHFITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPIVVVKFNNSMFRKNFSNGQDTKAAPAGWANGTSKTLS
KEQLPYNVIAIGSQDRTITVWTTASARPLFVAKHFFSQSVVDLSWSPDGYSLFACSLDGS
VANFHFEAKELGYKLSDSELDELKRSRYGDVRGRQSNLAESPAQLLLEEASAKQSASKKG
TSIVQQFQAPPKVSSDVPNPAPVVQSKKPALPEAEKKTSGPTAEDMNKVTRLSSPVKQRE
YRRPDGRKRIIPEAVGFPSNQDNIPSRSQNQVVDFSSLDQRMNGIGPSYGSNSNSNNSGV
KDRSGVTARANITESLVIQKASASAGSDGMLSVERIGSVVPGSLTCASLSIHVLDKKDNE
DSLPVCLEAKPVERAAGDMIGVGGAFSTKETEIRCTRGTETLWLDRISAKVTVLAGNANF
WAVGCEDGYLQVYTKCGRRAMPAMMMGSAAIFIDCDDCWKLLLVTRRGVMYIWDLYNRTC
ILQDSLASLVASPDESSANHAGAVKVISAKFSRCGFPLVVLASRHTFLFDMSMKCWLRIA
DDCFPASNFASSFSSPQGGELGKLQIDLGKFMARKPIWNRVTDDGLQTRAHLETQLAASL
ALKSPQEYRQCLLSYVRFLAREADESRLREVCENFLGPPMGMLGSASSMDSKNPSWDPDV
LGMKKHKLLREDILPSMASNRKVQRLLNEFMDLLSEYEAAKSKVDPMDVTRAPQPAASQ
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgattacggagaagccaagctggattcgccacgagggcctgcagatcttctccatcgac
atccagcccggcggcctccgcttcgccactggcggcggcgaccagaaggttcgaatatgg
agcatgaaatctgtggataagaataatgccaacaatgattccagccaagggttgctagct
acaatgcgtgatcattttggatcagtaaattgtgtgagatgggcaaggcatggtcgctat
ctggcttctggatcagatgatcaggttatcctaattcatgaacgaaaagctggttctgga
acatctgagtttggtagtggggaacctccagatgtagagaattggaaggttgttatgacc
ttaagagggcatactgcagacgtggtagatcttaattggtcccccgatgattcaacattg
gctagtggcagcttggataatactgttcacatatggaacatgaccaatggtatgtgcact
gccgtcttgagagggcattccagcttggtcaaaggtgttacctgggatcctattggctct
ttcattgcaagccaatcagatgataagtctgttataatatggcgtacaagcgactggagt
cttgctcacaagacagaaggccattgggaaaaatctcttggttcaacattttttaggcga
cttgcatggtcaccttgtggccacttcattactacgactcacggcttccagaaacctagg
cattcagcccctgtgcttgaaagaggcgagtggtctgctacctttgactttctagggcat
aacgcacctatcgtggtcgttaagtttaataactcaatgtttcgtaagaatttctcaaat
ggtcaagacacaaaagctgcaccagctggttgggccaatggaacatcaaagacattatca
aaagaacagctaccatataatgttattgctattggaagtcaggacagaacaattactgtt
tggacaacagcgagtgcgcggccattgtttgttgctaagcattttttctctcaaagtgtg
gttgatttatcttggagccctgatggttattcactttttgcatgttccttggatggatct
gttgccaactttcactttgaagcaaaggagcttggatacaagttaagtgattctgaactg
gatgaattgaagaggagtagatatggtgatgtcagaggacgacaatcaaatctggctgaa
agccctgcacagttactgctagaagaagcatcagcaaagcaatcagctagcaaaaagggg
acttccattgtccagcaatttcaagcacccccaaaagtttcttcagatgtgcctaaccca
gctcctgttgtgcaaagtaagaaacctgctttgcctgaagctgagaagaaaacatcaggt
cctactgctgaagatatgaataaagttactcggttatctagtccagtgaagcagagggaa
taccggcgtcctgatggccggaaaagaataatcccagaggctgttggatttccttccaac
caggataacatacccagccgttctcagaaccaggttgtggatttttcatccctagatcag
cgaatgaatgggataggaccatcttatggtagtaacagtaacagtaacaactctggagtt
aaggatcgctctggtgttacagcaagggcgaacattacggagagtcttgttattcaaaaa
gcttcagccagtgctgggagtgatggaatgttgagtgtagaacgcattggatctgttgtt
ccaggctctttgacctgcgcctcactttctatacatgtgttagataagaaagacaatgag
gattccttgccagtctgccttgaagcaaagcctgtagaacgcgctgcaggtgatatgatt
ggtgttggtggtgccttttcaacaaaagaaactgagataaggtgtacaagaggaacagaa
actctttggttggatcgcatatctgcaaaggttactgtcttggcaggaaatgcaaatttc
tgggctgttggctgtgaagatggttacctgcaggtttacacaaaatgtggaaggcgagca
atgccggcaatgatgatggggtctgcagccatttttatagactgtgacgactgctggaaa
ttgcttcttgtcacaagaagaggtgtaatgtacatatgggacctctataacaggacctgc
attttgcaggactcattggcttctttggttgcatctccagatgagtcgtcagctaatcat
gctggtgcagtaaaggttatatccgctaaattctcaagatgtggttttcccttagttgtt
cttgccagtcgccatacttttctttttgacatgagcatgaagtgctggttaaggattgcc
gatgattgttttccagcatcaaattttgctagctcatttagttccccccaaggtggagag
ctaggcaagttgcagattgatctaggcaagttcatggctagaaagcctatatggaacagg
gttacagatgatggtttgcagacacgtgcccatttagagacccagttggctgcttctttg
gctttgaagtcaccacaggagtatcgccaatgccttctatcctacgtacggtttctggca
agagaggcagatgaatctcgtttacgtgaggtttgtgagaacttcctaggtcctccgatg
ggtatgcttggatctgcatcatctatggattccaaaaatccatcgtgggatcctgatgtt
ctcgggatgaagaagcacaaacttctcagggaagacatacttccatcgatggcatcgaac
cggaaagtccagcggctgctcaacgagtttatggatctcctatcagagtatgaagctgct
aagagcaaagttgacccaatggatgtcacacgggcgccacaaccagcagcaagtcaatga
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