Sorghum bicolor (sorghum): 8084073
Help
Entry
8084073 CDS
T01086
Name
(RefSeq) aspartic proteinase nepenthesin-1
KO
K22683
aspartyl protease family protein [EC:3.4.23.-]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbi01002
]
8084073
Peptidases and inhibitors [BR:
sbi01002
]
Aspartic peptidases
Family A1: pepsin family
8084073
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAXi_N
TAXi_C
Asp
Motif
Other DBs
NCBI-GeneID:
8084073
NCBI-ProteinID:
XP_002462959
UniProt:
A0A921RTI0
C5XAQ6
LinkDB
All DBs
Position
2:complement(69599010..69602466)
Genome browser
AA seq
448 aa
AA seq
DB search
MSSSTSQMASLAVLVFLVVCATLASGAASVRVGLTRIHSDPDITAPEFVRDALRRDMHRQ
QSRSLFGRELAESDGTTVSARTRKDLPNGGEYLMTLSIGTPPLSYPAIADTGSDLIWTQC
APCSGDQCFAQPAPLYNPASSTTFGVLPCNSSLSMCAGVLAGKAPPPGCACMYNQTYGTG
WTAGVQGSETFTFGSAAADQARVPGIAFGCSNASSSDWNGSAGLVGLGRGSLSLVSQLGA
GRFSYCLTPFQDTNSTSTLLLGPSAALNGTGVRSTPFVASPAKAPMSTYYYLNLTGISLG
AKALSISPDAFSLKADGTGGLIIDSGTTITSLVNAAYQQVRAAVQSLVTLPAIDGSDSTG
LDLCYALPTPTSAPPAMPSMTLHFDGADMVLPADSYMISGSGVWCLAMRNQTDGAMSTFG
NYQQQNMHILYDVRNEMLSFAPAKCSTL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatcgacttcacaaatggcatcgctcgccgtgctcgtcttcctggtggtctgc
gcgacgcttgcctccggcgccgccagcgtccgcgttgggctcacgcgcatccactccgac
cccgacattaccgcgcccgagttcgtgcgcgacgcactgcgccgcgacatgcaccggcag
cagtcccggtcgttgttcggccgcgagctcgccgagtccgacggcaccacggtgtccgcg
cgcacccgcaaggacctgcccaacggcggggagtacctgatgacgctgtccatcggcacg
ccgccgctgtcgtacccggccatcgccgacacgggcagcgacctcatctggacgcagtgc
gcgccctgcagcggcgaccagtgcttcgcgcagccggcgccgctctacaacccggcgagc
tccaccacgttcggcgtgctcccctgcaacagctccctgagcatgtgcgcgggggtgctg
gcggggaaggcgccgccgcccgggtgcgcctgcatgtacaaccagacgtacggcaccggg
tggacggcgggcgtgcagggctccgagaccttcaccttcggctcggcggccgccgaccag
gcccgcgtccccggcatcgccttcggctgcagcaacgccagcagcagcgactggaacggc
tcggcggggctcgtcggcctgggcaggggcagcctgtcgctcgtctcgcagctcggcgcc
ggcaggttctcctactgcctcacgccgttccaggacactaacagcaccagcacgctcctc
ctcggcccgtcggcggcgctcaacggcaccggcgtccgctccacgccgttcgtcgctagc
ccggccaaggcgcccatgagcacctactactacctcaacctcaccggcatatccctcggc
gcgaaggcgctgtccatctctccagacgccttctccctgaaagccgacggcacaggcggc
ctcatcatcgactccggcacgaccatcacctcgctggtcaacgccgcgtaccagcaggtc
cgcgccgcggtgcagtccctggtgacgctgcccgccatcgacgggtcggactccacgggg
ctcgacctgtgctacgcgctgccgactccgacgtcggcgccaccggccatgccgagcatg
accctccactttgacggcgcggacatggtgctccccgcggacagctacatgatctcgggc
tccggcgtctggtgcctggccatgcggaaccagacggacggcgccatgagcacgttcgga
aactaccagcagcagaacatgcacatcctctacgacgtccggaacgagatgctgtcgttt
gctccggccaagtgcagcactctttga
DBGET
integrated database retrieval system
