Sorghum bicolor (sorghum): 8084186
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Entry
8084186 CDS
T01086
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8084186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8084186
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
8084186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_Nup35
Nup35_RRM_2
MutL
Motif
Other DBs
NCBI-GeneID:
8084186
NCBI-ProteinID:
XP_021313231
LinkDB
All DBs
Position
1:complement(5813890..5817357)
Genome browser
AA seq
303 aa
AA seq
DB search
MEKKEHEPRKLFIGGIPRVGLTADMVRGHFARYGHVVEALVMAYPDGFGRGFGFVEFEDE
EAVLRALDSKESDMHDAFFNCRVDVKRAEKKQETRSAQTSTTSSSNGDLKVFVGGLGDNV
TKDHLIDYFERFGTITDVVMISHRDTRKPRGFGFVTFDSKEATVKVLKDRFHYLNGIKVE
TKNAEPRYQRRYQNGHHYDSMNMVKGGMYSPHSRYYDSMDMAKGGMYSPHTLLYVPYYNG
PYLAYPYSYPYHYTPMDYGYMGNQMDNTYDSRLSHVKGSQQKIGIPGSTCVKSDLAKSDS
NLL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaggagcacgagccgcggaagctcttcatcggcgggatcccacgcgtgggg
ctcactgcggacatggtcaggggccacttcgcccgctacgggcacgtggtggaagcgctg
gtcatggcgtacccggacggcttcggacgcggtttcggcttcgtcgagttcgaggacgag
gaggcggtgctcagggcgttggactccaaggagagcgacatgcacgacgcctttttcaac
tgcagggtcgatgtgaagagggcagaaaagaaacaagaaacaagatctgcacagactagc
actacctctagttcaaatggtgatttgaaggtctttgtgggagggcttggggataatgtc
accaaagaccatctcatagattatttcgagaggtttggcacgataactgatgttgtcatg
atttctcatagagacacaagaaagccaaggggttttggctttgtcacatttgattccaag
gaagctacagtcaaggttttaaaggataggtttcattatttgaacgggataaaagtggag
actaaaaatgctgaaccaaggtatcagcgcaggtatcaaaatggacaccattatgattca
atgaacatggtcaagggcggaatgtactctccgcacagtaggtattatgattcaatggac
atggccaagggtgggatgtactctccgcacactttactctatgtcccttactacaatggt
ccatatttggcttatccatactcatatccctatcattacacacctatggactatggctac
atggggaaccaaatggacaacacatacgatagcagattgagtcacgtcaagggaagtcag
cagaaaattggcataccgggttccacatgcgtgaaatcagaccttgcgaagtcagattcc
aacttactgtga
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