Sorghum bicolor (sorghum): 8084335
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Entry
8084335 CDS
T01086
Name
(RefSeq) coatomer subunit alpha-3
KO
K05236
coatomer subunit alpha
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8084335
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8084335
Membrane trafficking [BR:
sbi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
8084335
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8084335
Exosomal proteins of bladder cancer cells
8084335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_Aladin
Beta-prop_RIG_2nd
Fis1_TPR_C
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_DCAF12
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
8084335
NCBI-ProteinID:
XP_021311582
LinkDB
All DBs
Position
3:2602251..2608904
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AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLAFHPRRPWILSSLHSGVIQMWDYRMGTLLNRFDEHDGPVRGVHFH
ATQPLFVSGGDDYKIKVWNYKTQRCLFTLHGHLDYIRTVQFHHECPWIVSASDDQTIRIW
NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKSASPADDILR
LTQMNTDLFGGIDAVVKYVLEGHDRGVNWASFHPSLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVLFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFCVSGDTVFYVKDRFLRFFEYSTQKEVQLAPIRRPG
SVSLNQSPRTLSYSPTENAVLICSDADGGSYELYIVPKDSAGRSDYLQEAKKGAGGSAVF
VARNRFAVLERSSNQVLVKNLKNEIMKKSPLPIATDAIYYAGTGNLLCKAEDRVAIFDLQ
QRLVLGELQTPAVKYVVWSSDMESVALLSKHAVVIASKKLVHQCTLHETTRVKSGAWDEN
GVFIYTTLNHMKYCLPNGDSGIIKTLDVPIYVTRVIGNNIFCLDRDGKNKLIAVDASEYI
FKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNI
QIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGYLDKVGF
MCKIAGQNNNLMGQFHNALYLGDAKKRIEILENAGQLPLAYVLAVTHGLTEIAERIAAEL
GENVPCLPEGKSHSLLIPPAPLTACGDWPLLRVMRGIFEGGLDATGRAELEEDDEASGAD
WGDEDLDIVDASEVVANGGDYFDAEEGEPNEEDGEEGGWDLEDLELPPDTETPKSAGNAR
SAVFVAPTAGIPVSQIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKPLFLDLH
MGSHSYLRALAAAPVISVAVEKGWNESASPNVRGPPALIFSFSQMEDRLKAAYKATTEGK
FPEALRQFLNILHTIPVIVVDSRREVDEVKELIEIVREYILGLKMELKRKELRDDVTRQQ
ELAAYFTNCKLQRIHMRLVLASAMALCFKQKNYATAKHFARMLLENSPQEAQARKARQVL
QACQDKDDSHQLNYDFRNPFVVCGATYVPIYRGQKDISCPYCGSRFVPSIEGQLCTICEL
AIVGADASGLLCSPTQLK
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgcgc
cgcccatggatcctgtccagcctccacagcggcgtcatccagatgtgggactaccgcatg
ggcaccctcctcaaccgcttcgacgagcacgacgggcccgtcagaggcgtccacttccac
gccacgcagccgctcttcgtgtccggaggtgatgattataagattaaggtctggaactac
aagactcaacgctgcctcttcacacttcatgggcaccttgattacattcgcactgtgcaa
ttccaccatgagtgcccatggatcgtaagtgctagcgacgatcagacaatccggatctgg
aattggcagtcacgcacatgtgtggccgtgctaactgggcataaccactatgtcatgtgt
gcctccttccatcctaaagaggatctggttgtatcggcctcgcttgatcagactgtacgt
gtctgggatattggggccctgaggaagaagtcagcatcacctgcagatgacatcctccgt
ctcactcagatgaacacggatctatttggaggcattgatgctgtagtcaaatatgtcttg
gaaggccatgaccgtggggtcaactgggcctcatttcatcccagtttgcctctcattgtt
tctggggcggatgaccggcaggtgaagatatggagaatgaatgataccaaggcttgggaa
gttgatacattgaggggccacatgaataatgtttcttgtgtgttgttccatgcgaagcaa
gacatcatcgtgtctaactcagaagacaaaagcattcgcatctgggatgccacaaagaga
actggcattcagacatttaggcgggaacatgaccgtttctggatccttgctgctcaccct
gaaatgaaccttcttgctgctggtcatgacagtggcatgattgtgttcaaattagagagg
gaacgcccagccttctgtgttagtggtgacacagttttctatgtgaaggatcggtttctc
aggttctttgaatactccacacagaaggaagttcagttggctccaataagaagacctgga
tcagtcagcttgaaccagtcgcccaggacactatcgtatagtccgaccgaaaatgctgtc
ttgatttgctctgatgctgatgggggttcatatgaactctacattgttcccaaggattct
gctggcaggtctgattacttgcaagaggcaaagaagggagctggtggttctgctgttttt
gtggcgcgcaacaggtttgcggtccttgagaggagtagcaatcaagttttggtgaagaat
ctgaagaatgaaatcatgaagaaaagcccccttcctattgcgacggatgcaatatattat
gctgggacaggtaacttgctatgcaaggctgaagaccgggtggccatctttgatcttcag
caaaggctagttctcggagagctacagacacctgctgtcaaatatgttgtttggtccagt
gatatggaatctgttgcactcctgagcaagcatgctgtggttatagctagcaagaagctt
gtccatcaatgcacactgcatgagaccacccgtgtgaaaagtggtgcctgggatgagaat
ggtgtgttcatctacactacactgaaccatatgaagtactgccttcctaatggagacagt
gggatcataaaaacccttgatgttcctatttacgtgacaagggttattgggaacaacatt
ttctgcctagatcgtgatggaaagaacaagctgattgcagttgatgcatcagagtacatt
tttaagctagcccttctcagaaaacgctatgatcatgttatgagtatgattaagaactcc
cagctgtgtgggcaggctgtgatttcttatttacaacagaaaggttttccggaagttgct
ctgcactttgtgaaggatgagaaaaccagatttaacttagctcttgagagtggtaacatt
caaattgcagttgcttctgcaaaggagattgatgacaaggatcactggtacaggttggga
attgaggccctgaggcaaggaaatgttggtattgtggaatatgcataccaacgaacaaaa
aattttgagaggcttgcttttctgtatctcattactggttacttggacaaggtgggcttc
atgtgcaaaattgctggacaaaataataatttgatgggacaattccacaatgcattgtat
cttggggatgctaagaagagaattgagatcttggaaaatgctgggcagctacctcttgct
tatgttcttgctgtcactcatgggctcactgaaattgctgagaggattgctgctgaatta
ggcgagaatgttccttgtctgcctgaaggaaaatcacactcgctactgattccccctgca
cctctcacagcctgcggtgattggccattgctgagggtaatgcgtggtattttcgaaggt
ggactggatgctactggaagggcagagcttgaagaagatgatgaagcttctggtgctgac
tggggtgatgaagacttggatattgttgatgcaagtgaagtggtggcaaatggtggtgat
tattttgatgcggaggagggtgaaccaaatgaggaggatggtgaggaaggtggctgggac
ttggaagatctggaacttccacctgatacagagactccaaaatctgctggcaatgctcgc
tctgctgtatttgtcgctccaacagcaggcatccctgtcagccaaatctggacacaaaaa
tcttctctggctggggagcatgcggctgcagggaactttgacacagcaatgaggttgctt
agccggcagttgggcatcaagaactttgctccgctgaagcccttgtttcttgatctgcat
atgggcagtcattcatatctccgcgcacttgctgctgctccggttatatctgttgctgta
gagaaaggttggaacgagtccgcaagtcctaatgtaagaggccctcctgcacttattttc
agtttctcacaaatggaagacagactcaaggccgcctacaaagctacaactgagggcaag
ttcccagaagcactgaggcagttccttaacatcttacataccatccctgtaatcgtcgta
gattcacggagagaagttgatgaagtgaaggaattaatcgagatagtgagggagtatatt
cttggtctgaagatggaactcaagagaaaggaattgagggatgatgtgacccgccaacag
gagttggctgcttacttcacaaactgcaagcttcagagaattcatatgaggcttgtgctt
gcaagcgccatggctctttgcttcaagcagaaaaactacgctactgcgaaacactttgca
aggatgcttcttgagaacagccctcaagaggcccaagcaaggaaggctcgacaggtgctg
caagcttgccaggataaggatgattctcaccaactgaactatgacttcagaaatccattt
gttgtttgtggcgctacatatgttcctatctaccgcggccaaaaggatatttcttgccca
tattgtggatcccggtttgttccttccatcgaagggcagctttgtaccatatgcgagctt
gccatagttggggcagatgcttcaggtctgctctgctcccctacgcagctgaagtaa
DBGET
integrated database retrieval system
