Sorghum bicolor (sorghum): 8084374
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Entry
8084374 CDS
T01086
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8084374
03036 Chromosome and associated proteins [BR:
sbi03036
]
8084374
Transcription factors [BR:
sbi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
8084374
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
8084374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
CDC45
Nop14
YL1
Motif
Other DBs
NCBI-GeneID:
8084374
NCBI-ProteinID:
XP_002457217
UniProt:
A0A921RBY0
C5XMK7
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All DBs
Position
3:complement(3592349..3599329)
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AA seq
639 aa
AA seq
DB search
MTGGHHFNNILLGGRGGTNPGQFKVYSGGLAWKRQGGGKTIEIDKADVTAVTWMKVPRAY
QLGVRIKDGLFYRFIGFREQDVSSLTNFIQKNMGVTPDEKQLSVSGHNWGGIDIDGNMLT
FMVGSKQAFEVSLADVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNTQFV
GDENRPPAHILWETILKFADVGSSEEPVVTFDGIAILTPRGRYSVELHLSFLRLQGQAND
FKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDLALSK
ELLVDKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDGL
LYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISFHYFDLLVKLKNDQEHLFRNI
QRNEYHNLFNFINGKNIKIMNLGGDGQGASGVVTDVLRDTDDDAVDPHLERIKNQAGDDE
SDEEDEDFVADKDDSGSPTDDSGDEDSDASDSGGEKEKSSKKEASSSKPVQKRKPKARDD
EGHEKKKAKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPTTEIAKKLGEMWQKMSS
EEKQPYIQQAQVDKKRYEKESAVYRGEATADVDSGNESD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcggccaccacttcaacaatatcctcctcggggggcgcggtggcacgaaccct
ggtcagtttaaagtgtattctggtggacttgcatggaagagacaaggtggaggaaagacc
attgagattgacaaagctgatgtaaccgcagttacttggatgaaagtccccagagcatat
cagcttggagtcaggattaaggatggcctgttctaccgatttattggcttccgtgaacag
gatgtgagcagcttgaccaacttcatacaaaagaatatgggtgtcacaccagatgaaaaa
cagctttctgttagtggccacaattggggagggattgatatagatggaaacatgctaacc
tttatggttggttcaaagcaagcatttgaagtatccctagcagatgttgcacaaacccag
atgcaaggaaaaacagatgttctcttagagcttcatgttgatgatactactggagccaat
gagaaagactccctcatggatttaagttttcatgtgcctacttcgaatactcagtttgtt
ggggatgagaatcgccctccagctcacattttatgggagactatattgaaatttgctgat
gttggttcttctgaagaaccagttgtcacatttgacggaattgcgattcttacaccaaga
ggacgttatagtgttgagcttcatctgtcatttctgcgactccaaggacaagctaatgat
ttcaaaatccaatacagcagcatcgttcgcctctttcttttgccaaagtcaaacaatcct
catacatttgttgttatcactcttgatccaccaatccgtaaaggacaaacattgtatcct
cacattgttattcagtttgagacagaggcagtagttgaaagagacctggcattgagtaaa
gagctgttggttgacaaatacaaggacaggcttgaggaatcttacaagggtctaatacat
gaggtatttaccaaagtcctccgtggtctatctggtgctaaagtcacaaggccaggttct
ttcagaagttgccaagatggatatgcagttaaatcatcactcaaagctgaagatggactg
ttatatccacttgaaaagggtttcttcttcttgccaaagccacctacactcattcttcat
gaggagattgagtttgttgaatttgaacgtcatggtgctgggggtgccagtatatcattt
cactattttgacctccttgtcaaactgaaaaatgaccaagagcatctcttcagaaatatt
caaaggaatgagtaccacaacctcttcaacttcatcaatggaaagaacattaaaataatg
aaccttggaggagatggtcaaggtgcaagtggtgtagttacagatgttctacgagacact
gatgatgatgctgttgatccacatctagagcgtattaagaatcaggctggggatgatgaa
agtgatgaagaggatgaagattttgttgcagataaggatgatagtggatctcctactgat
gactcgggtgatgaggattcagatgctagtgatagtggtggtgaaaaagagaaatcatcc
aagaaggaagcaagcagttcaaagccagttcagaaaaggaagcctaaggccagggatgac
gaagggcatgagaagaaaaaggcaaagaagaaaaaagatcctaatgcccccaaaagagca
atgacaccgttcatgtatttctcaatggctgaacgaggaaacatgaagagcagcaaccca
gatttgccgacgactgagattgcaaagaagcttggggagatgtggcaaaagatgtcaagc
gaagagaagcagccttacatccagcaggcccaggtcgacaagaaacgttatgaaaaagag
tctgccgtctatcgtggtgaagctacagctgatgtggattctggcaacgagtctgactag
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