Sorghum bicolor (sorghum): 8084396
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Entry
8084396 CDS
T01086
Name
(RefSeq) homeobox-leucine zipper protein HOX33
KO
K09338
homeobox-leucine zipper protein
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8084396
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
8084396
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
START
MEKHLA
Homeodomain
bZIP_1
ZPR
Homeobox_KN
KIP1
HALZ
Phage_APSE1_p49
Motif
Other DBs
NCBI-GeneID:
8084396
NCBI-ProteinID:
XP_002443548
UniProt:
C5YRY3
LinkDB
All DBs
Position
8:complement(60200491..60207113)
Genome browser
AA seq
857 aa
AA seq
DB search
MAMVASRERRLSPPGGAAQGAPQVDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIR
DCPILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSR
LVFDNGYMKNRLHSPSVATTDTSCESVVTSGHHNQQQNPAVLHPPQRDANNPAGLLAIAE
ETLAEFMSKATGTAVNWVQMVGMKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEI
LKDRASWYRDCRHVDILHVIPTGNGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGS
LVICERSLTQSTGGPSGPNTPNFIRAEVLPSGYLIRPCDGGGSMIYIVDHVDLNASSVPE
VLRPLYESPKILAQKMTAAALRHIRQIAHESSGEMPYGVGRQPAVLRTFSQRLSRGFNDA
VSGFPDDGWSSLLSSDGAEDITISINSSPNKLIGSHVSPSPFFSAMGGGIMCAKASMLLQ
NVPPAILVRFLREHRSEWADPGVDAYSAASLRANPYAVPGLRAGGFMGNQVILPLARTLE
HEECLEVIRLEGHGFSHEEVLMSRDMFLLQLCSGVDENAPGACAQLVFAPIDESFADDAP
LLPSGFRVIPLDAKTDVPSATRTLDLASALEVGSGGGLRALSDSSGTCTTRSVLTIAFQF
SFENHLRDSVAAMARQYVRGVMASVQRVAMAIAPSRLGPHIELKHPPGSPEALALATWIG
RSYRAHTGTEIRWSDTEGADSPLMPFWKHSDAILCCSLKPAFTLKFANSAGFDILETTLV
NIQDLPLEAVLDDDGQKALFAQLSKIMQQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGD
DGAPQCLALMLVNWTFI
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggtcgcgagcagggagaggcggctctccccgccgggcggcgccgcccagggc
gcgccgcaggtggacgcgggcaagtacgtgcggtacacgccggagcaggtggaggcgctg
gagcgcgtctacagcgagtgccccaagcccagctcgctccgccggcagcagctcatccgc
gactgccccatcctcagcaacatcgagcccaagcagatcaaggtctggttccagaaccgc
agatgccgggagaagcagcgcaaggagtcttctcgtctacaaaccgtgaaccggaagctg
agcgcgatgaataagctgctgatggaggagaatgaccggctgcagaagcaggtgtcccgt
ctcgtctttgacaacgggtatatgaagaatcgactccacagtccttctgtagccaccacc
gacacaagctgtgagtctgtggtgacaagtggtcaccacaaccaacagcaaaacccagca
gttctgcatcctccacaaagggatgcgaacaacccagcaggtctactcgctattgctgag
gagacattggcagagttcatgtccaaggcgactggaactgctgtcaactgggtgcaaatg
gttgggatgaagcctggtccggattccgttggaatcatcgctgtttcgcacaactgcagt
ggcgtagcagcacgagcttgcggccttgtgagccttgagcccacaaaggttgctgagatc
cttaaggatcgcgcatcgtggtatcgagattgtcggcatgttgatatcctccatgttatc
cctacgggtaacggtggaacaattgagctgatctatatgcagacttatgcactgacaact
ctggcggaaccgcgcgacttttggacgctccgatacactagtggtcttgatgatggcagt
cttgtgatctgcgaaaggtcattgactcagtccactggaggtccttctggacctaacact
ccaaattttatcagagctgaggtgcttcctagtggttatctgattcgaccttgtgatggg
ggaggttccatgatttacattgtggatcatgttgatctgaatgcttctagtgtgcccgag
gttcttcggccactctatgaatctcctaagatactggcacagaagatgactgctgcggca
ttgcgacacattaggcaaattgcacatgaatcaagtggtgaaatgccctatggtgttggt
cgacagccggctgttctcagaactttcagtcaaaggctcagcagaggcttcaatgatgct
gtgagcggctttccagacgatggctggtcttctttgttgagtagtgatggtgctgaggat
attacaatttcaatcaactcatctccaaacaaacttattggatctcatgtcagcccttcc
ccattcttttctgctatggggggtggcatcatgtgtgcaaaagcatcaatgttactgcag
aatgtgccacctgctatacttgtgcgatttttgagggagcatcgctctgaatgggctgat
cctggtgttgatgcttattctgctgcctctttgagggccaacccatatgctgttccaggt
ttaagggctggtgggtttatgggcaaccaggttatactaccccttgcacgcaccttggag
catgaagagtgcttggaggttattaggcttgaaggacatggctttagccatgaggaggtg
ctcatgtctcgggatatgtttcttctgcagttgtgcagtggtgttgatgagaatgcacct
ggtgcatgtgcacagcttgtctttgctcctattgatgaatcttttgctgatgatgcaccg
ttgctaccctcaggcttccgtgtgataccacttgatgctaagacggatgtgccatctgcc
acacgcacactcgaccttgcttctgcactggaggttggatcaggtggaggtctgcgtgct
ttaagcgatagttccggcacatgcaccacgagatctgtcctgaccatcgccttccagttt
tcgttcgagaatcaccttcgcgatagtgtggcagcaatggccaggcagtatgtcaggggt
gtgatggcgtctgtgcagagggtggccatggcaattgctccttctcgccttggcccgcat
atcgaactgaagcatccaccgggctctcctgaggcacttgctctagctacgtggatcggc
aggagctacagggcgcacactggaacggagatccgctggtcggacactgaaggcgcggat
tctcccctgatgccattctggaagcacagcgacgcaatactctgctgctctctgaagccg
gctttcacgctcaagttcgccaacagtgccggcttcgacatcctggagacgaccctggtg
aacatccaggacctgccgctggaggctgtcctcgacgacgacggccagaaggccctgttt
gcgcagctctccaagatcatgcagcagggcctggcgtacctccccggcggcgtgtgcaga
tcgagcatggggcggcaggcatcgtacgagcaggcggtggcgtggaaggtggttggtgac
gacggtgcccctcagtgcctggcgctcatgctcgtcaactggaccttcatctga
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