Sorghum bicolor (sorghum): 8084825
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Entry
8084825 CDS
T01086
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
8084825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8084825
04121 Ubiquitin system [BR:
sbi04121
]
8084825
03029 Mitochondrial biogenesis [BR:
sbi03029
]
8084825
Membrane trafficking [BR:
sbi04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
8084825
Atg8 conjugation proteins
8084825
Ubiquitin system [BR:
sbi04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
8084825
Mitochondrial biogenesis [BR:
sbi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
8084825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
Pyr_redox
2-Hacid_dh_C
Motif
Other DBs
NCBI-GeneID:
8084825
NCBI-ProteinID:
XP_021312295
LinkDB
All DBs
Position
3:complement(55484134..55490237)
Genome browser
AA seq
1023 aa
AA seq
DB search
MAGAGAVGIPRELMVQRIQSLVEEGFWDALRRLKLDVLGTDDSPIPITGYYTPRQRRPMA
SFFNLRSGSLVPPSLNSVGDRNNCPVPGTLINTNNMRGFQNLDIEQLLKAEAKKILDDIV
SGKVEEDPSVLLRFLVTSFADLKNWKVYYNVAFPSLVFNSRMTLLNLQPASKVLTKEEAA
SIYTSLQKWRASSETTVVPFFLVSISSDSSASIRQLKDWKACQGNYKKLLFGFYDHGCRS
DCPGWVIRNYVTFLSIRWKIEKVQFFCYREYKGNPDLEQSLIGEASFPSPCGVDDPDFLP
DAIGWEGINPRKGTKEMKPKEIDLQSMNPASQDEEKQLMHLKLMGWRHFPVNIDKLSHVR
VLLLGAGTLGCEVARLLTTWGVRKLTVVDSNCVATSDLVKQSLYIDKDCGVPRVTAIVTH
LKERCPAVEVEGIQMEIPVPGHPVSSSKMASVLDDFKHLQTLVAANDAVFLLTDTWESRW
LPTLLCASENKIAISAVLGCDSYLVMRHGAGPGTSGGTDEVITQIENLSTEDAPGHQRLG
CCFCNDASSLIKPIPYETLPGLTSVASGKAVELFARMLHHPDEIHAPGDTAGMETEHQLG
LLPHQLRGSLPKCGLSMELSNSSVNCMACSIAVLSEYRRRGLDFVMQAINYPTYLKDFTG
VSDLKMPDTCPKIPASISVNSDKVSDVRCLLLGAGTLGCDVARILMDCGVRKLTIVDSGC
VVVSNLARQSLYTSDDRGAPKATAILRHLVERCPSVDAQGIRMEIPMPGHPVSPGEAAGV
LQDCERLKELVASHDAVFLLTDTRESRWLPTLLCTNENKIAITAALGYDSYLVMRHGAGP
GISCDASSVATATDKLSTEDALGRQRLGCYFCNDVIAPVDSVSNRTLDQQCTVTRPGLAS
IASGRAADLFTRMLHHPDGIHAPGEIAGTSSGHQHGILPHQMRGSLSQYNLLTLLGYSSS
NCTACSNAVLSEYRRRGMDFVMQVINEPTYLEDLTGLTDLMKSTSYSQVEWVDETDEDEF
VEV
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgccggtgcggtgggcatcccaagggagctgatggttcagcgcatccagagc
ttagtggaggaggggttctgggacgcgctccgccgcctcaagctcgacgtcctcggcacc
gacgactcgcccatcccaatcaccggttattatactccccgccagcgtcgcccgatggca
agcttcttcaacctacggtcaggatcattggtgccgccatctctcaattctgttggcgac
agaaataattgtccagtcccagggaccctcataaacactaataacatgaggggattccaa
aacctagatatagaacagcttctgaaagcagaagcaaagaagatcttggatgacattgtg
tctggtaaagtagaagaggatccttctgttctacttaggttccttgtgacatcatttgcc
gatttaaagaattggaaggtctattacaatgttgcattcccctcattggttttcaactca
agaatgaccctgctcaacctgcaacctgcctcaaaagtgctcactaaagaagaggcagca
tccatatatacatcattgcaaaagtggcgcgcttctagtgaaacaacagttgttccattc
tttctggttagtatatcctcagattcctctgcctctataaggcaacttaaggactggaaa
gcttgccaggggaactataaaaagctactatttggattttatgatcatggatgccgctca
gattgccctggctgggtaattagaaactatgttacctttctgagcatccgatggaagatt
gagaaagtccagtttttctgctaccgtgaatataaagggaaccctgatctagaacagtcc
ctcattggtgaagcatcatttccatcaccttgtggtgtggatgaccctgattttctacct
gatgctattggatgggaaggaataaacccaaggaagggaacaaaagaaatgaaaccaaaa
gagatagatcttcaatcaatgaacccggcaagtcaggatgaagaaaaacaattgatgcac
ttaaagcttatggggtggcgccactttcctgtgaatatagacaagttatctcatgttcga
gttcttctcttgggtgctggaactcttggatgtgaagttgctcgtcttcttacgacctgg
ggtgtacggaaactaacggttgttgatagtaattgtgttgcaacgtctgaccttgtcaag
caatcactctacatagataaggactgtggagttccaagagtaactgcaatagttacacat
ctaaaagaaagatgtcctgcagtggaggttgaaggcatccaaatggaaataccggtgcct
gggcatcctgtttcttccagcaaaatggcaagtgtgcttgatgacttcaagcatctgcaa
acattagtggctgccaatgatgcagtcttcttgttaactgacacatgggagagcaggtgg
cttccaactcttctctgtgcaagtgaaaacaagattgctattagtgcagtattaggatgt
gacagttaccttgtcatgcgacatggtgctggaccaggaacaagtgggggtacagatgaa
gtgattactcagatagaaaatttgtccacagaagatgctcctggtcatcaaagattgggc
tgttgtttctgcaatgatgcctcttcccttattaagccaattccttatgaaacactacct
ggacttacctcagttgcatctggcaaagcagtggagctctttgccaggatgttacatcac
cctgatgagatacatgccccaggcgatactgctggtatggaaacagaacatcagcttggt
ctattgccgcatcagctacgagggtcactcccaaagtgtggtttatctatggaactgagc
aattcctcagtcaattgtatggcatgttctattgctgtattgtcagagtatagaagaaga
ggattggattttgtcatgcaggccatcaactatccaacatatctgaaagattttacaggc
gtttctgatttaaaaatgccagatacttgtcctaaaataccagctagcatctctgtaaat
tcagacaaggtttctgatgtccgatgtctactattgggtgctggaactcttggatgtgat
gttgcacgcattcttatggactgtggtgtacggaagctaacaatagttgatagtggttgt
gtagttgtgtcaaatttagcgagacagtcactctatacttctgatgaccgtggtgctcca
aaagcaactgcaatacttaggcatctagtggagagatgtccttcagtggatgcacaaggc
attagaatggaaatacctatgcctgggcatcctgtgtctcctggtgaagcagctggtgtg
ctccaagattgtgagcgccttaaggaattagtggcttcccatgatgctgtcttcttgttg
actgacacaagagaaagtaggtggcttccaactctcctctgcactaatgaaaacaagatt
gctattactgcagcattagggtatgatagttaccttgtcatgcgacatggggctggtcct
ggcataagctgtgatgcttccagtgtggccactgccacagataagctatccacagaggat
gcccttgggcgtcaaaggctggggtgttatttctgcaatgacgtcattgctcctgttgat
tcagtttccaatcggacactggatcaacaatgtacagtgacacgacctgggttggcctct
attgcatctggacgtgccgcagaccttttcacaagaatgttacatcatccagatggcata
catgctccaggagagattgctggtacaagcagtggtcatcagcatggtatattacctcac
cagatgcgtggatcactatcgcagtacaacttactaaccctgttgggctattcctcgagt
aattgcacggcatgttccaatgcggtattgtctgaatatcggaggagaggaatggacttt
gtgatgcaagtgatcaatgaaccaacttatttggaagacctaaccggcctcacggacttg
atgaaatccacatcttactcgcaggtcgagtgggtagatgaaactgatgaagacgaattt
gtcgaggtctga
DBGET
integrated database retrieval system
