Sorghum bicolor (sorghum): 8084853
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Entry
8084853 CDS
T01086
Name
(RefSeq) neutral ceramidase
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00600
Sphingolipid metabolism
sbi01100
Metabolic pathways
Module
sbi_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
8084853
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
8084853
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Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Motif
Other DBs
NCBI-GeneID:
8084853
NCBI-ProteinID:
XP_021311041
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Position
3:complement(56272608..56276348)
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AA seq
794 aa
AA seq
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MEASSSSSRRSRRGPDSPSPTTRRLCLLLLFVLQTCIRPASPAVSAAAAAASPSPYLVGV
GSYDITGPAADVNMMGYANAEQVASGIHFRLKARAFIVAEPGGNGKRAVFVNLDACMASQ
LVTIKVLERLKARYGDLYNEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDVIVN
GIEQSIVEAHSNLRPGKIYVNKGELLDAGVNRSPSAHLNNPADERSKYQYNVDKEMTLVK
FVDDEIGPIGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWAEQNVVPKQAVHVSSE
HPRRVSALIPEPNEITDDDLIRLASSYKASGGRQISSSSMAKRIRSAEQNKLKFVSAFCQ
SNCGDVSPNVLGAFCTDTNRPCDFNHSTCNGQNELCYGRGPGYPDEFESTRIIGNRQFLK
AVDLFNSASEEIQGKVDYRHTYLDFSQLEVNVSSSTGGQHQTVKTCPAAMGFAFAAGTTD
GPGAFDFKQGDVKGNPFWRLVRNVLRPPGPEQVKCQAPKPILLDTGEMKVPYDWAPSILP
IQIIRIGQLVILCVPGEFTTMAGRRLRDAVKKVLTNSGQFDNNVHVVLAGLTNTYSQYVT
TYEEYQIQIYEGASTLYGPHTLSAYIQEFQKLATSMVTNKEVVPTNLQPPDLLNRQIGLL
PGVIVDETPPGVKFGDVRSDVPANSTFRKGSVVNATFYSACPRNDLLTDGTFALVEKLDG
GSDWVPVYDDDDWSLRFRWSRPLPVSPMSFATLEWTVPEDATSGVYRLRHFGASKPLIGS
INYFTGTSSAFVVR
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggaggcatcatcgtcttcctcccgccgcagcagacgcggccctgattctccctctccc
acgacgcgacgtctgtgtctccttctgctctttgttcttcagacctgcatccgcccggcg
tccccggcggtatcagcagcggcggcggcggcctcgccgtcgccgtacctggtgggggta
gggagctacgacataacggggcctgcggcggacgtcaacatgatggggtacgcgaacgcc
gagcaggtcgcgtcagggatccacttcaggctcaaggcgcgcgcgtttatcgtcgctgag
cctggtgggaatgggaagcgcgccgtgttcgtcaatctcgatgcctgcatggcgtcgcag
ctcgtcactatcaaggtgctcgaaaggctgaaagcaaggtacggtgacctttataacgag
aagaatgtggctatcagtggaatccacactcatgctgggccaggaggttacctgcagtac
gtggtttatattgtcacatctctcgggtttgttcgccaatcatttgatgtcattgtcaac
ggcattgagcagagtattgttgaagctcacagtaatctccgtcctggtaaaatatatgta
aacaaaggtgaactccttgatgctggtgtgaaccgcagcccgagcgcacacctaaacaac
ccagctgatgagagaagcaaatatcagtacaatgttgataaagaaatgacacttgttaag
tttgtagatgatgaaattggcccaattgggagtttcaattggtttgcaacccatgggaca
tcaatgagccgtacaaactctttgattagcggcgataacaaaggtgcggctgcacgtttc
atggaagattgggcagaacagaatgttgttccaaagcaggcagttcatgtgagttctgag
catccgcgaagagtctccgcgctaattcctgaaccaaatgagataactgatgacgactta
atacgattggcatcatcctacaaagcctcaggtggtaggcaaatatcaagttcaagtatg
gccaagcgcattagaagtgctgaacaaaacaagcttaaatttgtttctgcattctgccag
tcaaactgtggagatgttagtccaaatgtcttgggagcattttgtacagacaccaaccgt
ccttgtgactttaatcacagtacgtgtaacgggcagaatgaattatgctacggacgaggc
ccgggatatcctgacgaatttgaaagtacccgtatcattggcaataggcaattcctcaag
gctgttgatcttttcaattcagcttctgaagaaatacaaggcaaagttgactacaggcat
acctacctagatttctcgcaactcgaagtgaatgtttcttcaagcacaggaggtcagcat
cagacggtgaaaacatgcccagcggccatggggtttgcctttgctgctggaaccacagat
ggtcctggagcttttgattttaaacaaggagatgtcaagggaaacccattctggaggtta
gtacgaaatgtacttaggccaccgggcccagagcaagtgaaatgtcaggctccgaaacca
atactgctagataccggtgaaatgaaggttccatatgattgggcaccttcgatacttcca
attcagatcataagaatcggtcagctggttatcttgtgtgtccctggagaattcacaaca
atggctgggaggcggctacgtgatgctgtcaaaaaagtgctaaccaacagtggtcagttt
gataacaatgttcatgttgttctcgcggggctaacaaacacctactctcaatatgtcaca
acttatgaagaatatcagattcaaatatacgagggagcatcaacgttgtatggtcctcac
accttgagcgcctacattcaagaattccagaaacttgctacatccatggttacaaacaag
gaggttgttccaacaaatctgcagcctcctgatctactaaaccggcaaattggtctgctc
ccaggtgtcatagtcgacgagacacctcccggcgtcaagtttggagatgtcaggtcagac
gtccctgcgaactcaaccttcaggaagggcagcgttgtgaacgctacattctactcggcc
tgcccaaggaatgatctcctcaccgacggcactttcgcgctcgttgagaagctggatggc
ggaagcgattgggttcctgtctatgatgacgacgattggtcgctgcgcttcaggtggtca
aggccattgccggtgagtccaatgagttttgcaacgctggagtggacagttcctgaagat
gccacatccggtgtttacagattgagacattttggtgcctctaagccgctgattgggtcc
atcaactatttcacagggacctctagcgcatttgtagtacgttag
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