Sorghum bicolor (sorghum): 8084856
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Entry
8084856 CDS
T01086
Name
(RefSeq) heat stress transcription factor C-1a
KO
K09419
heat shock transcription factor, other eukaryote
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8084856
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
8084856
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
DUF2201_N
Cwf_Cwc_15
Hemerythrin
PSME4_C
DUF4175
NUDE_C
UPF0184
CC_Bre1
UPF0242
FUSC
Motif
Other DBs
NCBI-GeneID:
8084856
NCBI-ProteinID:
XP_002455983
UniProt:
C5XEC7
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All DBs
Position
3:56376544..56378645
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AA seq
365 aa
AA seq
DB search
MMDGLHTELALGLLAGCGVGGGGGGDQLLQTAAFVAKTYQMVCDPRTDALVRWGRDNNSF
VVVDAAGFSRLLLPCFFKHSNFSSFVRQLNTYGFRKVHPDRWEFAHESFLRGQTHLLPRI
VRRKKRGEGGGGACSASGGDAQAQSHYAAAAGCCTGTGEDHHHHHQEEEEADPDNEKEAA
LLEEVQRLRQEQTAIGEELAQMSRRLQATERRPDQLMSFLARLAEDPDGVTRSLVEQAAE
KKRCRMQLASQPVRPLPPPLPPAPPPVPVPVPALHHHPLLAALGGGAAKGLDGWQWEWAE
QKPSAVVLPTFDPPAATYCGVGVHHVPNLGGGNGGGIIGMGLTAADETAVETTPFPFCLL
GQGFF
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgatggacggcctccacacggagctcgcgctggggctgctcgccgggtgcggcgtcgga
ggcggaggcggaggcgaccagctcctccagacagcggcgttcgtggccaagacctaccag
atggtgtgcgacccgcggacggacgcgctcgtccggtggggcagggacaacaacagcttc
gtcgtcgtcgacgccgccggcttctcgcggctgctcctcccctgcttcttcaagcacagc
aacttctccagcttcgtgcgccagctcaacacatacgggttccggaaggtgcacccggac
cggtgggagttcgcgcacgagtcgttcctgcgcggccagacgcacctgctgccgcgcatc
gtgcgccgcaagaagcgcggcgagggaggcggtggagcctgctccgcctccggcggcgac
gcgcaggcgcagtcgcactacgcggcggcggccggctgctgcaccggtacgggcgaggat
catcatcatcatcatcaggaggaggaggaagcggatccggataacgagaaggaggcggcg
ctgctcgaggaggtgcagcggctgcggcaggagcagacggccatcggggaggagctggcg
cagatgagccggcgcctgcaggccacggagcggcggcccgaccagctcatgtcgttcctc
gccaggctcgccgaggaccccgacggcgtcacgcgcagcctcgtggagcaggccgccgag
aagaagcgctgccgcatgcagcttgcctcccagcccgtccgcccgctcccgcctccgctc
ccgccggcgccgccgccagtgccagtgccagtaccagcactccaccaccacccgctgctg
gcggcgctcggaggcggcgccgccaagggcctggacggctggcaatgggaatgggcggag
cagaagccgtctgctgttgtgctccccaccttcgatccccccgccgccacctactgcggg
gtcggggtgcaccatgtgccgaatctcggaggcggcaacggcggcggcatcatcggcatg
ggcctgactgcggctgacgagaccgcggtagagaccacccccttcccgttctgcctgctc
ggccagggtttcttttga
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