Sorghum bicolor (sorghum): 8084952
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Entry
8084952 CDS
T01086
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
sbi04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8084952
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
8084952
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbi01009
]
8084952
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8084952
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8084952
03041 Spliceosome [BR:
sbi03041
]
8084952
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
8084952
Protein phosphatases and associated proteins [BR:
sbi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
8084952
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
8084952
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
8084952
Spliceosome [BR:
sbi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
8084952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
8084952
NCBI-ProteinID:
XP_002468119
UniProt:
A0A921S785
C5WQ33
LinkDB
All DBs
Position
1:complement(70493827..70498882)
Genome browser
AA seq
349 aa
AA seq
DB search
MAAAPAAGGQGGVGMDTALVDDIIRRLLEVRTARPGKQVQLSESEIRQLCNVSREIFLSQ
PNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLA
YKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKVFTECFNTLPVAALIDDKI
LCMHGGLSPDLAHLDEIKSLQRPTDVPDQGLLCDLLWSDPGKDVQGWGMNDRGVSYTFGA
DKVSEFLQKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDETL
MCSFQILKPAERKQIYGVKQNVIVKAILLPADLRLSCGCITTTACWRQA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgccagcggcgggagggcagggcggcgtgggcatggacaccgcgctcgtc
gacgacatcatccgccgcctgctcgaggtgcggaccgcgcgccccgggaagcaggtgcag
ctctccgagtcggagatccgccagctctgcaacgtctcccgcgaaatcttcctcagccag
cccaacctcctcgagctcgaggcgcccatcaagatctgcggtgacatccatggtcaatac
agtgatcttctaaggctttttgaatatggaggctttcctcctgaagccaactatctattc
ttaggcgattatgttgatcgaggcaaacaaagtttggagactatatgccttcttcttgct
tacaaaatcaagtaccctgagaacttttttcttctgaggggcaatcatgaatgtgcctcg
ataaacagaatatatggattttatgatgaatgcaagcgtcgatttaatgtgcggctatgg
aaggtcttcacagaatgttttaacactctacctgtggctgctcttatcgatgataaaata
ttatgtatgcacggcggactctcccctgatctagcacacttggatgagataaagagcttg
caacgtccaaccgatgtaccagatcaaggactactgtgtgatttgctttggtcagatcca
ggaaaagatgttcaagggtggggcatgaatgatagaggagtctcatatacctttggcgct
gacaaggtttcagaattcttgcaaaagcatgatcttgatcttatttgtcgtgctcaccag
gttgttgaagatgggtatgaattctttgctgacagacagcttgtcaccatattctcggcc
cccaattattgtggtgaatttgataatgctggtgcaatgatgagtgttgatgaaactttg
atgtgttcgttccaaattctgaagcctgctgagagaaaacaaatttatggggtcaaacaa
aatgtgatagtgaaagcaattttgcttccagcagatctgaggctctcctgtggatgcata
acgacaacagcatgctggcgccaagcttga
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integrated database retrieval system
