Sorghum bicolor (sorghum): 8084982
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Entry
8084982 CDS
T01086
Name
(RefSeq) ubiquitin-activating enzyme E1 3 isoform X1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8084982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8084982
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8084982
Enzymes [BR:
sbi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
8084982
Ubiquitin system [BR:
sbi04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
8084982
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
8084982
Exosomal proteins of other body fluids (saliva and urine)
8084982
Exosomal proteins of colorectal cancer cells
8084982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_FCCH
E1_UFD
E1_4HB
Motif
Other DBs
NCBI-GeneID:
8084982
NCBI-ProteinID:
XP_002461268
LinkDB
All DBs
Position
2:77486557..77492029
Genome browser
AA seq
1066 aa
AA seq
DB search
MRCLRFLRRGFLAMLPSKRSAGADGGESKRAKLGESPSSAAAAVGTASNGTRNGAAPEID
EDLHSRQLAVYGRETMRRLFAADVLVSGLNGLGAEIAKNLALAGVKSVTIHDVKMVEMWD
LSGNFFLSEQDVGKNRAVACVSKLQELNNAVLVSALTEELTSEHFSKFQAVVFTDISLEK
AYEFDDYCHSHQPPISFIKAEVCGLFGSVFCDFGPEFTVLDVDGEDPHTGIIASISNDSP
AMVSCVDDERLEFQDGDLVVFSEVQGMAELNDGKPRKVKNARPFSFSIEEDTSSYGVYTK
GGIVAQVKEPKVLRFKALRDAMRDPGDFLLSDFSKFERSPVLHLAFQALDKFKKEHGRYP
TAGCEQDAQTFLKFAADINEASVGPKLENIDEKLLCHFASGSRAVLNPMAAMFGGIVGQE
VVKACSGKFHPLYQFFYFDSVESLPTYQLDPQDLKPSNSRYDAQVSVFGSKLQKKMLDAN
IFIVGSGALGCEFLKNLALMGVSCSSKGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKST
VAAAAAIAINPSLQIDALQNRASPDTENVFHDTFWDGLDVVINALDNVNARMYMDMRCLY
FQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARS
EFEGLLEKTPNEVNSFLSNPAQYAAAMRKAGDAQARELLERVSECLDKERCNTFEDCITW
ARLRFEDYFSNRVKQLTFTFPEDAATSTGTPFWSAPKRFPRPLQFSATDSSHINFIMAAS
ILRAESFGIAIPDWAKNASKLADAVDKVAVPKFEPKKGVNIVTDEKATNLSSASVDDVAV
INDLLTKLEEYAKGLPPGFQMKPIQFEKDDDTNFHMDLIAGFANMRARNYSIPEVDKLKA
KFIAGRIIPAIATSTAMATGLVCLELYKVIAGEHPIEDYRNTFANLALPLFSMAEPVPAK
VMKHQDLSWTVWDRWTIKGNLTVAELLQWFSDKGLSAYSMSCGTSLLYNSMFARHKDRLQ
KKVVDVAREVAKVEVPEYRKHIDVVVACEDDDGNDIDIPLVSVYFR
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcttacggtttctgcgcaggggtttccttgctatgcttccatccaagaggtcc
gcgggcgccgacggcggcgagtccaagagggctaagctgggggaatcgccatcctccgcc
gccgccgccgtagggacggccagtaacggcacccggaatggggcggcaccggagatcgac
gaggacctgcacagcaggcagctcgccgtgtacggcagggagacaatgcgccgcctcttc
gccgccgatgtcctcgtctctggcctcaatggcctgggtgctgagattgcaaaaaatctt
gctcttgctggagtcaaatctgtcaccatacatgatgtcaaaatggtggaaatgtgggac
ttgtctggcaatttcttcttatcagagcaagatgtcggaaagaacagggctgtagcctgt
gtgtcaaagctgcaagagctgaataacgctgttctggtctctgctctaacagaggaattg
acatcagagcacttttctaagttccaggctgttgttttcactgatataagtttggagaag
gcttatgaatttgacgactattgtcacagccaccagcctccaatctcttttatcaaagct
gaagtctgtggccttttcggcagtgtcttctgtgattttggacctgagtttactgtcctt
gatgttgatggtgaagatccacatactggtataattgcatccatcagcaatgacagtcct
gcaatggtatcctgtgttgatgatgagaggcttgagtttcaggacggtgatcttgttgtt
ttctctgaggtccaaggcatggcagaattgaatgatggaaaaccaaggaaggtaaaaaat
gctaggccgttttcatttagcattgaggaggacacaagtagctatggtgtttatacaaaa
ggtggtatcgttgcacaagtgaaggaaccaaaggttctacgtttcaaggcactaagagat
gcaatgagagatcctggcgatttccttctgagtgatttttcaaagtttgaacgatcacct
gtgcttcatctagcctttcaagctctggataaatttaagaaggaacatgggcggtatcct
accgctggctgtgagcaggatgctcaaactttcctcaagtttgctgctgatattaatgaa
gcatctgttggtccgaagctggaaaacattgatgaaaagttgctctgtcattttgcaagt
ggttctcgagctgttttgaacccaatggctgcaatgtttggtggtattgttggtcaagaa
gttgtgaaggcatgttcagggaaattccatccgctttaccagttcttctactttgattct
gttgaatctctccctacatatcagttggatccccaagacttgaagccttcaaatagccgc
tatgatgctcaggtctctgtttttggttccaagcttcagaagaagatgctagatgcaaat
attttcattgtgggttctggcgctcttggttgtgagttcttgaagaaccttgccttaatg
ggtgtctcttgcagctccaagggaaagctaactataacagatgacgatgtcattgagaaa
agcaatctgagtcgccagtttctgttccgtgactggaacattgggcaagcaaagtctact
gtagctgctgcagccgccattgctatcaaccccagcctccaaattgatgctcttcagaac
cgtgcctctccagataccgaaaatgtgttccatgacacattctgggatggactggatgtt
gttatcaatgcccttgataatgtgaatgctaggatgtatatggacatgaggtgcctgtac
ttccagaagccactactggagtcagggacattgggtgcaaagtgcaatacacaaatggtc
attcctcaccttactgaaaattatggagcttctagagacccacccgagaagcaggcaccc
atgtgcacagtccattcttttccacacaacattgatcattgcttgacatgggcccgttca
gagtttgagggtttgctagagaaaacaccaaatgaagtaaattcttttctgtctaatcct
gctcaatatgctgctgccatgaggaaggcaggtgatgcccaagcaagggaattacttgaa
cgcgtctctgaatgtcttgacaaggagcgatgcaatacatttgaggattgtataacttgg
gcccgattgagatttgaggattatttctcaaaccgcgtgaagcagcttacattcactttt
cctgaagatgctgctactagcacaggcactcctttctggtccgccccaaagcgctttccc
cgtcctctgcaattttcagccactgattcatctcacatcaacttcatcatggctgcttca
atactgagagcagagtcatttgggattgctatacctgactgggcaaagaatgcaagtaag
ctggctgatgcggtcgataaggttgcagttcctaaatttgagccaaagaaaggggtgaat
attgtgacagatgagaaggctactaacctttctagtgcctcggttgatgatgttgctgtt
attaatgaccttttgaccaagttggaagaatatgccaagggcttgcctccaggattccaa
atgaaacctatccaattcgagaaggatgatgacactaattttcacatggatttaatagct
gggtttgcaaacatgcgcgcgaggaactacagcattcctgaggttgacaagttgaaggct
aagttcatcgctggaaggatcatcccggccatcgcaacttcaacagccatggccacaggt
ctcgtgtgcctggagctatacaaggtcattgctggggagcaccccatcgaggactaccgc
aacacatttgccaacctagctcttccgctgttctcaatggccgaaccagttccggcgaag
gttatgaagcatcaagatctgagctggaccgtatgggaccgctggactatcaagggcaac
ctgactgtcgctgaactcctgcagtggttcagtgacaagggcctcagcgcttacagcatg
tcctgcggcacttctcttctgtacaacagcatgttcgcgaggcacaaggataggctgcag
aagaaggttgttgatgtcgccagggaggtggcaaaggtggaggttcctgaataccggaag
cacatagatgtcgtggtggcatgtgaggatgatgacgggaatgacattgacattcctctc
gtctcggtttacttccgctag
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