Sorghum bicolor (sorghum): 8085150
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Entry
8085150 CDS
T01086
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X2
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8085150
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
8085150
TFIIIC, fungi type
8085150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_8
TPR_1
TPR_2
TPR_14
TPR_16
TPR_7
TPR_CcmH_CycH
TPR_17
TPR_12
ANAPC3
TPR_9
TPR_15
ARM_TT21_5th
TPR_Slam
TPR_11
Alkyl_sulf_dimr
TPR_EMC2
SNAP
ARM_TT21_2nd
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
8085150
NCBI-ProteinID:
XP_002445208
LinkDB
All DBs
Position
7:complement(8497737..8523127)
Genome browser
AA seq
886 aa
AA seq
DB search
MSAVTEDGDQRGSALEAGDRGRDGDEDFDEDEEDGFEFGDADEAMHCVEMAERSTTAAAM
RAHAQDYEALAARKRKALAEDQPQREEGSKRPRQDQLSEAEAATMFDQLMEGFGLRRKRR
SKDGKRRGRKKGTKNKGSAEVIKKLGDATLLFAEEKFNEAIPILHEIVRIAPNLSDSYYL
LGSIYNEIGELDKAINFLMLAAYVSPKDASLWKKLIPLAKKKGDASLARHCILKAMRADP
EDVDLKYLCGDMYRNLCDYQKAAEIYEQIVRIYPANIAVRKVAAQMYRECGQIDKAINLL
EDYANTQTSNIDWSVLDLLISLYLRNNVLSEALRQIKRAQLQLGSQEKLPVQLQAKEIIC
HAYCGDMKHAEIFLRDVHLEPSKENIDVIKELASTLEKMGQYEYAVKFYLLIENVATHND
GGLYFDHKEMGSSYVKVAQCYMVLGDKKNAIPYFYKALQSMKDNIDIRLTLSSLLIDDDK
TDEAATLLSPPKIPEAQSANTPDQQKPWWCDGKVKMQLAKIYYNKGKLEDFVDTIFHPIL
ETLNVEYANRKVRPMKKLPNTVLHERVKVLGEQRRDSVFQGLKPIASPDELVKANRAKKI
IEKRAAANELKPDDQLCRTLALLQRYWDALQIINRTLKLGNDTLTDDKKEELRSLGAQIA
YRAPDPSHGFKYVRYVVQQHPYSLAAWNSYYKVISRIEDRFPQHFKHLLRTREAKPDCVP
PIIISGHRFTAISQHQSAARDYLEAYKLDPENPLINLCVGTALISLTLGFRLQNKNQCIV
QAFAFLYRYLRLCDNSQEALYNIARAYHHIGLNTLAAVYYEKALAIEEKDHPIPKLPYEA
GSRVPEDLRPGYCDVRREAAFNLHLIYKKSGATDLARRILKTYCTI
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgtgacggaggatggcgaccagcgaggttccgcccttgaggcgggggatcgc
gggcgcgacggggatgaggatttcgacgaggatgaggaggacgggttcgagttcggtgac
gccgacgaggcgatgcactgcgtggagatggcggagaggagcaccaccgccgcggcgatg
cgtgcccacgcgcaggactacgaggcgctcgccgcgcgcaagcgcaaggcccttgccgag
gaccaaccccagagggaggagggttccaaaaggccaagacaggatcaactttcagaagcg
gaagcagcaaccatgttcgaccaactgatggaaggctttggtcttcggcgcaaaagaagg
tcgaaagatggcaagagaaggggaagaaagaaaggaacaaagaataagggcagcgctgaa
gttattaaaaagttgggtgatgctactctactttttgctgaagaaaaatttaacgaggca
attcctatactacatgagattgtgcgaattgcgccaaatttgtcagattcatattatcta
cttggtagcatttataatgagatcggtgaactagataaagccataaacttcttgatgctt
gctgcatatgtttccccaaaagatgcatctctgtggaagaaactcattcctttggcaaag
aaaaaaggggatgcttctctggcaagacactgtattttaaaagcaatgagagcagatcca
gaagatgtagatctgaagtatctttgtggtgatatgtatcgcaatctttgtgactatcag
aaagctgcagaaatatatgaacagatagtcagaatttatcctgccaatattgctgttcgt
aaagtagcagcacagatgtacagagagtgtggtcaaattgacaaagctattaatttgttg
gaagactatgccaatactcaaacttccaacattgattggagtgttctagatttgttgata
tcactttatctaagaaataatgttcttagtgaagcactaaggcagatcaagagggctcag
ctacaattgggatctcaagagaaactaccagtacaattgcaggcaaaagaaataatctgc
catgcatattgcggtgacatgaaacatgctgagattttccttcgtgatgtgcatttggag
ccatcaaaagaaaacattgatgtgattaaggaacttgcaagcactttagaaaaaatggga
caatatgagtatgcagtaaagttttacctgctgattgaaaatgttgctactcataatgat
ggtggcttatactttgatcacaaagaaatgggtagttcgtatgtcaaggttgctcagtgc
tacatggtcttgggggacaaaaaaaatgctattccttatttttataaagccttacaaagc
atgaaggacaatatcgatataagattgaccttatcgtcccttcttattgatgatgacaag
acagatgaagctgccactctgctttctccccccaaaattccagaggcgcagtctgctaat
actccagaccaacagaaaccttggtggtgtgatgggaaagtaaagatgcagcttgcaaaa
atttattacaataaaggcaagctggaagattttgtggacacaatttttcatcctattcta
gaaactttgaatgttgaatatgctaatcgaaaggtcaggccaatgaaaaagcttccaaac
actgttctgcatgaaagagtcaaagtattgggtgagcaacgccgggatagtgtatttcaa
ggattaaagccaatagcatcacctgatgaattagtaaaggcaaacagagcaaagaaaata
attgagaaaagggcagctgcaaatgagttaaaacctgatgatcagctttgtcgaacatta
gctttgctgcagcgatattgggatgcactgcagattatcaaccgaactctcaaacttgga
aatgacacactcactgatgacaaaaaagaggaactcagatccttgggtgctcaaatagct
tatagagctccagatcccagtcatggctttaagtatgtccgttatgttgttcagcagcac
ccatattctcttgctgcatggaattcctactataaggtgatatcaagaatagaggacagg
tttccacagcatttcaaacatctccttcggacaagagaagcaaaacctgactgtgtgcct
ccgataatcatatctgggcatcgatttactgctataagtcagcatcagtcagctgctcgg
gattacctggaagcttataagttggacccagaaaaccctcttattaatctttgtgtaggc
actgccttgattagtttgacccttggcttcaggcttcagaataagaaccagtgcattgtc
caagcttttgctttcctgtacagataccttcgcctttgtgataacagtcaggaagccttg
tacaacattgctcgggcatatcaccacattggcctgaataccttggcagctgtttactac
gagaaggctttggcaatcgaggagaaagatcatcccatacctaagcttccatacgaggct
ggttcacgtgtgccagaggacctgaggccagggtactgtgacgtgcgtagagaggcagcg
ttcaatctgcatctaatctataagaaaagtggagctaccgatcttgcaagacggattctg
aaaacttactgcactatctaa
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