KEGG   Sorghum bicolor (sorghum): 8085204
Entry
8085204           CDS       T01086                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03020  RNA polymerase
sbi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    8085204
  09124 Replication and repair
   03420 Nucleotide excision repair
    8085204
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    8085204
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8085204
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     8085204
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      8085204
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 8085204
NCBI-ProteinID: XP_021315934
LinkDB
Position
4:complement(1058274..1059190)
AA seq 143 aa
MSGEEEENAAELKIGEEFLKAKCLMNCEVAIILEHKYEQIQQHSSESDPSSQVSQVFEKS
LQYVKRFSRYKNPDAVRQVRETLSRYGLAEFELCTLGNLCPDTSGEATALVPSLKSGGRF
VGDARDEKIEKMLNDLSLIKKFE
NT seq 432 nt   +upstreamnt  +downstreamnt
atgtccggcgaggaggaggagaacgccgcggagctcaagatcggcgaagagtttctcaag
gccaagtgcctgatgaactgcgaggtggcgatcatcctggagcacaagtacgagcagatc
cagcagcactcgtcggagtcggacccgtcgtcgcaggtgtcgcaggtgttcgagaagtcg
ctgcagtacgtgaagcgcttcagccgctacaagaaccccgacgccgtgcgccaggtccgc
gagacgctcagccgctacggactcgccgagttcgagctctgcacgctcggcaacctctgc
cccgacaccagcggcgaggccaccgcgctcgtcccgtccctcaagtccggcggcaggttc
gtcggagacgccagggacgagaagatcgagaagatgctcaacgacctctccctcatcaag
aagttcgagtag

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