Sorghum bicolor (sorghum): 8085233
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Entry
8085233 CDS
T01086
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
8085233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8085233
Enzymes [BR:
sbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
8085233
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
8085233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
8085233
NCBI-ProteinID:
XP_002451417
UniProt:
C5XT13
LinkDB
All DBs
Position
4:1514102..1533111
Genome browser
AA seq
1104 aa
AA seq
DB search
MPGLVYYPSTPRRQARITYHGEFKVDVCFQYNEGAQIRHTFNFGHLPIMLMSKLCHLRGA
DPHKLVFHGEEATEMGGYFICGGMERLVRILILQKRNYPMGLVRSSFLKRGAGYTDKAVV
IRCVQRDQSSVSMKLYYLQNGSARLGFWLGGREFLLPVGIVLKALIDASDREIFTSLTCC
FSDKHGKGKGVVSTQLIGERAQIVLDEVRNLSLLTRTQCLVHIGQYFRSVMEGFEKDDYE
TVAEAVLKDYIFVHLENNHDKFNLLIFMLQKLYALVDQTASPDNADALQYQEALLPGHLI
TIFLKDRLQDWLRKSKRLIIEEVAKNKGFDLGNALEIRKFVTKYTSSVSRAIESMIKVGK
VNAQSGLDLPQRDGMTIQAERLNFHRYISHFRSVHRGSAFAKMRTTSVRKLLPESWGFLC
PVHTPDGEPCGLLNHMTSTCRISSFYNSEGVVKNFGEMKKLLSAELVRVGMNPVLPKIER
TGPPEVLHVHLDGRILGTIASATIEKAVNYLRTLKLLAHSGIPEDLEVGYVPLSFSGAFP
GLYLFTNPARFVRPVRNLFILSDGKQSIELIGPFEQAFMEIRCPDGGDGGRQEQFPATHE
EIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQT
PIVRTGTYNKYNMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIYQTECI
DLSTKSRDNVPETFAKSVLSRDTSSAIDSDGLPRLGQTVHPNEQYYSVHNSLTGVIRPVR
LKGTEPAFIDYVAVNGAGSKHGLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDID
MPFSANTGMRPDLIINPHAFPSRMTIAMLLESMAAKAGSLHGKFIDATPFANSVKQDKDP
RKPNSIVDELGPMLASYGFNYHGKEVLYSGVFGTEMDCEIFIGPVYYQRLRHMVSDKFQV
RTTGRIDQITRQPIGGRKHGGGIRFGEMERDALLAHGSSYLLHDRLHSCSDYHIADVCSL
CGSLLTATMIESNNQKKAKHEMLGLPTVRPPKNFACQACKTSKGMETVAMPYVFRYLAAE
LAAMNIKLELRLSNKSGLLPSQES
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgcccggtctggtgtactacccctctacccccaggaggcaagcaagaattacatatcac
ggggaatttaaagtcgatgtctgcttccagtataatgaaggggcacaaatcaggcatacc
ttcaattttggccatttgcctattatgttgatgtcaaaactgtgtcatctgagaggtgct
gatccccataaattagttttccatggtgaagaggcaactgaaatgggcgggtacttcata
tgcggcgggatggagagacttgtgcgtattcttattttacaaaagcgtaactatcctatg
ggattggttcgcagttcttttcttaaacgtggtgctggatacactgacaaagcagtggtc
ataagatgtgtccaacgtgaccagtccagtgtgtcaatgaagttgtattacctccaaaat
ggaagtgcaaggcttgggttttggttgggtggcagagagtttctgcttcctgttgggatt
gttctcaaggcccttatcgatgcaagtgaccgggaaatctttacaagcttgacttgctgc
ttcagtgataaacatggaaaaggaaagggagttgtcagtactcaactaattggtgaaagg
gcacaaatagttcttgacgaagtcagaaatctgtcccttttgactcgcacacagtgtttg
gtgcatattgggcaatacttccgatctgtgatggaaggatttgaaaaagatgactatgaa
actgttgctgaagctgttctaaaggactatatttttgtacacttggaaaacaaccatgat
aaatttaatctattgatatttatgctgcagaaactttatgctctggtagatcaaactgct
tcacctgacaatgctgacgcactacaataccaggaggctctattgcctgggcacttaatc
acaatttttctgaaggataggcttcaggattggctaagaaagtctaagcgtttaatcatt
gaagaggttgcaaagaacaaaggttttgacctcggtaatgcattggagataaggaaattt
gtaactaaatatacatcatctgtcagtagagctatcgagagtatgataaaggttgggaaa
gtgaatgcacaatcaggattggatcttccacagagagatgggatgaccattcaagctgaa
cggctcaactttcatcgttatatctcacacttccgttctgttcataggggctctgctttt
gctaaaatgcgtacaacatctgttagaaagttactcccagaatcatggggtttcctgtgt
ccagtccatacacctgatggagagccttgtggtttactgaatcatatgacttctacatgc
cgtatttcatcgttctacaactcagaaggggtggttaaaaattttggggaaatgaagaag
ttgctttctgctgagttggttcgtgttggaatgaacccagtgttaccaaagattgagcga
actggtcccccagaagtactccatgtccatttggatgggcgcatccttggtactattgct
tctgccacgattgagaaagcagttaattatcttcgtacattgaaacttctggcacactca
gggattcctgaagacctggaagttggttatgtcccacttagttttagtggagcttttcct
ggcttgtacctctttacaaatccagctagatttgttcgacctgtcagaaatctttttatt
ctatctgatggaaagcaaagtattgagcttattggaccatttgaacaggcatttatggag
atacgttgtcctgatggtggggatggtgggagacaagaacaattccctgcaactcatgaa
gagatccatcctacagctattctcagtgtagttgccaatctgacaccttggtctgatcac
aaccaaagtcctaggaacatgtaccaatgccagatggcaaagcaaactatgggtttttgt
ggacaagctctaaaattccgtactgatgtaaaagcattccacctacagacccctcagaca
ccaattgttcggacaggtacatataacaaatataatatggatgaatttccatctggaacg
aatgctattgttgcagtgctatcatacacaggttatgacatggaggatgccatgattttg
aataaatcagctgttgatcgtggaatgttccgtggacatatttaccagactgaatgcatt
gacttatcaacaaaaagcagagataatgttccagaaacctttgcaaagagtgtattatcc
agggacacaagttctgcaattgattcagatggtcttcctcgacttggacagactgtacat
ccaaacgagcagtactatagtgtccataatagcctcacaggcgtgataaggcctgtcaga
ctaaaaggcacagagccagcatttattgactatgttgctgtcaatggggcaggctcaaaa
catggcctgcagaaggcgaacattcgtttgcgtcgtgtgagaaaccctataattggtgac
aagttcagcagccgacatgggcagaagggtgtttgctctcagttgtggcctgacattgac
atgccattctctgcaaatactggcatgagaccagatctgattatcaatcctcacgcgttt
ccatcaagaatgactatagcaatgcttttagagtctatggcagcgaaggctggaagtcta
catggaaagttcattgatgcaacaccttttgcaaactcagtcaaacaggacaaggatccc
cgcaagcctaattcgattgtggacgaattgggtcccatgcttgcatcttatgggtttaat
tatcatggaaaagaggtcctttatagtggagtttttggcactgagatggactgtgagatt
ttcatcggacctgtttattaccagcgtcttcgtcatatggtctcagataaattccaggtc
cgcactactggtcgtatagaccagataacaagacaacccataggaggaaggaagcatggt
ggagggatccgattcggcgagatggagcgtgatgccctccttgcccatgggtcttcctac
ctcttgcatgacaggctccactcctgctcggactaccacattgcggatgtgtgctccttg
tgcgggagtctgctgactgcgacaatgatcgaatccaataaccagaagaaagccaagcac
gagatgcttgggctccccactgtgagaccgccaaagaactttgcatgccaggcctgcaaa
acaagcaaggggatggagaccgtggcgatgccgtatgtgttcaggtacctggctgctgag
ctggctgccatgaacataaagttggagctccggttgagcaacaaatcaggattgcttccc
agccaagaatcatga
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