KEGG   Sorghum bicolor (sorghum): 8085255
Entry
8085255           CDS       T01086                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    8085255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    8085255
Enzymes [BR:sbi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     8085255
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     8085255
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 8085255
NCBI-ProteinID: XP_002468227
UniProt: A0A921V3N4 C5WRS0
LinkDB
Position
1:complement(72541395..72557421)
AA seq 1228 aa
MEELQKDGGQQSNGSDSEPEAMVLDDNGAGKSHSMDGNRDSPVDVDEGQSSMDVDTKGKP
SLNDDVNGKSSEPYSNAPIDLSVESLEKFCKEASRSFFDEVGLISHQINSYNDFVSHGLQ
ELFDSLGEVIVEPGYDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGKDEGSVDFKPWHARL
QNMTYASRLIVEVNIQVYSLEKSDKSKTGNDGFVQKRDFMNETHWIFIGLLPVMVKSNLC
LLHSLKESECLFDAGGYFLVKGMEKVFIAQELRCLKRLWIIDRPCWMISFMSEMKRRRIY
IKLVESTRSEDFSGSKIISISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINT
ISATIKESDELCEGFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKAL
FLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAHLRLAEKRMVKAIQRDL
NSDRELQDLERYIDASIVTNGLSRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDL
RKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIE
SFISCGMSKLNDIPTEHIQRMDKIFLNGNWVGSCKDSASFVFRLRCMRRSSLIDPQVEIK
RDKHHKEVRVFSDAGRILRPLLVVENLKKIRKPKGRSFSFQELMQQEIIEFIGVEEEEDI
QCAWGIRHLFESEGAISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAI
GYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYTTFGRKDDFMRPEYFNGQNAI
VAVNVHQGFNQEDSLVMNRASLERGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKTE
SKRGRVDNLDDDGLPYIGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDE
GKNFAVVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHKGIVPDIVINPHAFPT
RQTPGQLLEAALGKGIACKGTMRYATPFTTASVDVIAEQLHRAGYSRWGTENVLNGRTGE
RMQSLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLL
AHGSAANLHERLFMLSDFSQMHICQTCERVANVVMRSVSGGKKIRGPYCGFCKSSENIVR
INVPYGAKLLYQELFSMGICLKFDTEVC
NT seq 3687 nt   +upstreamnt  +downstreamnt
atggaagagctacagaaggacggtgggcaacaatcaaatggctctgattctgaaccagaa
gctatggtgttggatgacaatggagcgggaaaatcccatagcatggatggaaacagggat
tctcctgtagatgtcgatgaaggccagtcatctatggatgtggatactaagggaaaacca
tccctcaatgatgatgttaatggaaagtcttctgagccatattccaatgctccaattgac
ctgagtgtggaaagcctagagaagttttgcaaagaagcatcaaggtccttctttgatgaa
gttggtctgattagccatcagataaattcctacaatgactttgtctcgcatgggcttcag
gagctttttgattcgctgggggaagtgattgttgaacctggctatgatccttcaaagaaa
ggatcaggtggctggaagcatgccatcatcaagtttgggagagtgaagcttgaaaagcct
gtgttttggactggcaaggatgaaggttctgttgattttaagccttggcatgctcgtctc
cagaatatgacatatgcttcaagacttatagtagaagtgaatattcaggtttattctttg
gagaaaagtgacaaatctaaaacaggaaatgatggttttgttcaaaaaagggacttcatg
aatgaaactcattggatatttattggcctccttccggttatggtgaaatcaaacttatgt
ttgttgcatagtctcaaggaaagcgagtgcttgttcgatgcaggtggatactttttggtc
aagggaatggagaaggtattcattgctcaagagctaagatgtctaaagaggctctggatt
attgaccgtccttgctggatgatctcttttatgtctgaaatgaagcgtagacgtatatat
attaaactagttgaatctacaaggagtgaagatttcagtgggagcaaaatcatttccatt
tcctttttgtatgcgacaatgccagtttggttgttgttctttgcacttggaatatcatca
gataaggaagcctttgatgtgatagatatgcaagattgcgatgcttctgttatcaacaca
atatctgcaactatcaaagaatctgatgaattgtgtgaagggtttcgtaaatcagataaa
gctcgtcaatatgttgatgagttggtaaaaagttcgagatttcctccagcggagtccttt
gatgactatattgctaggtttctctttcctgatattagtggaaatagaaacaaagcactt
ttcttagggtacatggtgaaatgtctgctaatggcttttactgggaagcgtaaatgtgat
aataaggatgatttcaggaacaagaggctggacctacctggtgaattgcttggaagggaa
cttagggcacatcttaggctggcagagaagcgcatggttaaggccattcaaagagatttg
aatagtgaccgtgagttacaagatcttgaacgctatatagatgcatcgattgttactaat
ggtctaagtcgtgccttttccactggttcttggtgccatccctacaaaagagctgaacgg
tgctcaggaattgttgcgactctaaggagaactaatcctcttcaaatgatgtctgacttg
aggaaaacccggcagcgggttgcttatgctgggaaagctggtgatgcaagatatccgaat
ccatcgtattggggaaagctgtgttttatgtccactccggatggtgaaaactgtggactt
gtgaaaaatctagctgttactgctattgttagctcaagggtggtgcagcccttgattgag
agcttcatttcttgtggaatgagtaagctgaatgacattcctactgagcacattcaaaga
atggataagatctttttgaatggcaattgggtgggatcttgtaaagattcagcttcattt
gtatttcgattgaggtgcatgagacgcagcagtctgattgatcctcaggttgaaattaaa
agggacaagcaccacaaggaggttcgtgtgttttctgatgctggacgaatcctcagaccc
cttcttgtggttgagaatcttaaaaaaatcagaaaaccaaaggggcgctcattctctttc
caggaattaatgcaacaggaaataattgagttcattggtgttgaagaggaggaagatata
caatgtgcgtggggaatcaggcatttgtttgagagtgaaggagcgatatctagttatact
cactgtgaactggatccttcctttcttctgggattaagctgcggtatcattccttttgca
aaccataattttgctcggagggtattataccaatctgaaaaacactcacaacaagctatt
ggttactcaacgacaaatccacacatcagagttgatactctttctcatcaactatattat
cctcagaggcctcttttcaaaacagttatagccgactgtcttggcagatcagattatact
acttttggaagaaaagatgacttcatgagaccagaatacttcaatggacaaaatgcaatt
gtagcagtcaatgttcatcaggggtttaaccaagaggattccctggttatgaatagggct
tctcttgaacgaggtatgtttaggactgaacacctcaggagctataaggcagatgtagaa
aacaaggatggaaccaaacgactgaaattgaaggaaaagatagactttggaaaaacagaa
agcaaaagaggacgtgttgacaatcttgatgatgatggcttaccttacattggtgcaagt
cttcagaccaatgacatcgttattggaaaagtctcagaatctggagaagaccacagtatt
aagctgaagcatacagaaaagggaatggttcagaaagtattgctttcagcaaatgatgaa
gggaagaattttgctgtggttactctaagacaggttcggacaccttgccttggagataag
ttttccagcatgcatggccaaaaaggtgttgttggatttctagaatctcaagagaacttc
ccatttactcacaaaggtatagtcccggatattgtgataaatccgcatgccttcccgaca
cgtcaaactcctggacagctgcttgaagctgctctggggaagggaatagcctgcaaaggt
acaatgagatatgcgacaccattcaccacagcatcagttgatgttattgcagaacagttg
cacagggctggttattcacgatggggaaccgagaatgtactaaatggccgaactggtgaa
agaatgcaatccttgattttcatgggccccaccttttatcagaggctgattcatatgtct
gaagataaggtgaaattccgtaatactgggccagtgcaccccctcacgaggcagcctgtt
gccgacaggaaaaggtttggtggagttaagtttggagaaatggagcgtgattgcctcctc
gcccatgggtcagctgccaacctgcatgaacgcctcttcatgcttagtgacttctcccag
atgcacatctgccagacatgcgagcgtgtggctaatgttgtcatgaggtctgtctccgga
ggcaaaaagatccgtggcccctactgcggtttctgcaagtcttcggagaacatagtgagg
atcaatgtgccctatggcgcaaagctgctctaccaggaactcttcagcatggggatctgc
ctcaagtttgataccgaagtctgctag

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