Sorghum bicolor (sorghum): 8085268
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Entry
8085268 CDS
T01086
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8085268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8085268
03036 Chromosome and associated proteins [BR:
sbi03036
]
8085268
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8085268
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
8085268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
8085268
NCBI-ProteinID:
XP_002468240
UniProt:
A0A921S5Z8
C5WSL4
LinkDB
All DBs
Position
1:complement(72699372..72707275)
Genome browser
AA seq
1293 aa
AA seq
DB search
MFSPAIRRPHLLNRRDREEGSPSPPPAAPAHSPSPHGFAVPDRPATGTPVPWNSSSLLAR
ISTSKRTDRTGDSDQIQPVRVAEFPQVVRNAQASLLQKNFSGKNMLAGGIDKETSLAWMI
CGNELFIWSYLASVAKDCIALDIPSSLIGYNDVKPLLGIQWTVCIMRWHSGGASTRNSGE
MLHRKSSTGVILCNKRTQAVAYWPDIYAEFNRSLVLSSSGDGEVSACDAASDCLRFNSLI
AAAVPGCIHECIAIASDPAGALWLFQCSPEGIHQRKVHADTLGDGGADHSQKSNGGRSLI
WLPNNVSSEGSDRKFFLLTNNEVQCWSISFLNDINVKKLGSHGIVGTDGDVGIKKDIAGQ
KNIWLLDMQIDERGKEFSILVATLCKDRVSGSNYTQYSLLTMLYKPNQKLSSEDNVAKVE
RFLEKKAPSQVIIPKARVEDDEFLFSMRLKTGGKPSGSVIILSGDGTATVAMYWRGSTRL
YQFDLPWDAGKVLDASVIPSAEDRDEGAWVVLTEKAGVWAIPEKAVLVGGVEPPERSLSR
KGSCNETIAEEKRRSQGFSASVVPRRVSSEAWSAGERQRPALTGIAQQSVVDEESEMLLN
RLFHDFIISSAVSEALQKLRAAGAFEKEGEMNIFVRTSKSIVNTLAKHWTTTREAEFLAS
TIVSSLVEKQQKHEKFLQFLVLSKCHEELASKQRAAMLTVMEHGEKLSGMAHLRELQNAL
IQQRSSTHLSPQSKTQGTGALWNLIQLVGEKARRNTVLLMDRDNAEVFYSRVSDIDDLFY
CLSHELQYIISREEHPSVQMQRALELANACIALVQAASHYRKDHKEWYPSPEGLITWNIQ
PVVRSGIWSLASLIMELLGDSGAADMSMKSSLWSQLEGLTDILLEAYIGLLTAQFERGQE
HGVLVQEYCERRDELLRSLYNLAKQIVEVKYQESKDGTDNLDLKESIFRKVISPILATAK
RHEGYQTLWQICYDLDDSDLLRSLMHDSVGPHGGFSFFVFKELVNRGDYSKLLRLGEEFQ
EELASFLKERSDLLWLHEICLNQFSSASETLHTYALRGSPDGDASFTTSRKPLSFVERSR
LLYLSKIAATAGKDIGYEVKVARIEADMRILKLQEEIVQHDPEYAQVKYTNALLGPSELI
EMCLRRDRELSFKAFEVFALTSSSFRSSNRGLLEACWMNATDQDDWVKLSEASTLEGWSD
ELIEESLQATVLFKASRLCYSPDAVVYDGTFEDVLPVKKEDVHLRGLESKCLSVEEVLMQ
HKDFPDAGKLMMTAVILGKELTFTATEPVEMDS
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgttctctccggcaatcaggaggccacacctcctcaaccgcagggacagggaggaggga
tccccttcgccgcctcctgctgctcccgcccattccccgtcgcctcacgggttcgccgtg
cccgaccgccccgccaccggcaccccggtcccatggaactcctcctccctcctcgctagg
atttcgacgtctaagcgaactgacaggactggtgattcggaccagatccaaccagtgcgc
gtagcggagtttccccaagttgttcggaatgcccaagccagcctgctacagaagaatttc
tctggcaagaacatgcttgctggtggcattgataaagaaacatcccttgcgtggatgata
tgcggaaatgagctttttatatggagttacttggcttctgttgcaaaagactgtattgca
cttgacattccatcttctcttatcggatacaatgacgtgaaacccctcctcggtattcag
tggacagtttgtataatgagatggcatagtggtggtgcatcaacaaggaatagtggagag
atgttgcatagaaaaagttcaactggtgtgatcctctgcaacaaaagaacacaagctgtt
gcttattggcccgatatctatgctgaatttaataggagcctagttcttagttcgtcaggt
gatggtgaggtgtctgcatgtgatgctgcatctgattgtttgaggtttaattcgcttatt
gcggctgcagttccaggatgtattcatgagtgcattgcaatagcttctgatcctgcaggt
gctttgtggctgttccagtgttcaccggaaggaattcatcaaagaaaagttcatgcagat
acattaggagatggtggtgccgatcattcccagaaaagtaatggtggaaggtccttgatt
tggttaccaaataatgtctcatctgagggttctgaccggaagttctttttattgacaaac
aatgaggtgcaatgttggagtatctcattcttgaatgacatcaatgtcaaaaaattaggg
tctcacggaattgttggtactgacggagatgtgggcattaagaaagatatagctgggcag
aaaaatatatggcttttggacatgcagatagatgagcgtgggaaggaatttagcattctt
gttgctacattatgcaaagatagggttagcgggtcaaactacactcaatattctcttttg
acaatgctgtacaagcctaaccagaagctttcgtctgaagataatgtagctaaagttgaa
aggtttttggagaaaaaagctccttctcaggtgataattcctaaggctagggtagaggat
gatgaattcttgttctccatgaggctaaaaactggtggtaagccttctggttctgttatc
atcctgtcaggtgatggaacagcaacagtggccatgtattggagaggttccacccgactt
tatcagtttgatctgccttgggatgctggaaaggtcctagatgcttccgttatcccatca
gctgaggacagagatgaaggtgcttgggtggttctaacagaaaaggcaggggtctgggca
attcctgaaaaagctgtattagttggtggggtggaacctccagaacgcagcttgtcacga
aagggtagttgtaatgaaacaattgctgaggagaaaagaagaagtcagggcttcagtgct
agtgttgttcccaggagagttagctctgaggcttggagtgctggagagaggcaaaggcct
gcattaactggcatagctcagcagtctgtggttgatgaagagtctgaaatgctactgaac
cgattatttcatgattttataatctccagtgcagttagcgaggcacttcaaaagcttaga
gcagcaggagcatttgagaaagagggtgagatgaacatatttgttcggacgagcaaatcc
attgtaaacacattagctaaacattggacaacaaccagagaagctgaatttcttgcctca
acaattgtttcgtcccttgttgagaagcagcaaaaacatgagaaattccttcagtttctt
gtcttgtcaaagtgccacgaagaactcgcttcaaagcaaagagcagcaatgctaactgtc
atggagcatggtgaaaagctctctggaatggcacaccttagggaattacaaaatgccctt
atccagcaacgctcaagcactcatttatcacctcagtcgaaaacccaaggtactggcgct
ctttggaaccttattcagttggttggtgagaaagctcgaagaaacacagttctcttaatg
gatcgtgataatgctgaagtgttctacagtagggtttctgatatagatgatctattttat
tgtttatctcatgagcttcaatacatcattagtagagaagaacacccatctgttcagatg
caacgtgcacttgagttagcaaatgcttgtatcgccttagttcaggcagcatcacactac
aggaaggatcacaaggaatggtatccatctcctgaaggactgataacatggaacatccaa
cctgttgtacggtctggaatctggagtttagcatccttgattatggagcttttgggagat
tcaggagctgcagacatgtcaatgaaatctagtctatggtctcagctggaaggactcaca
gatattctactggaggcatatataggccttttaactgcccaatttgaacgtgggcaggaa
catggtgtgctagtccaagaatattgtgaacgaagagatgaacttctcagatccctctac
aaccttgctaaacaaatagtggaggtcaaataccaggagtcaaaagatggtacggacaat
ctggatctgaaagaatctatatttagaaaggttatttctcctattttagcaacagccaaa
cgacatgaagggtaccagacactgtggcagatttgctatgatctagatgattcagatctc
ctccgcagcctaatgcatgatagtgttgggcctcatggcggattcagtttctttgtcttt
aaagagttagtcaacagaggagactactctaagctgttaaggctaggtgaagaattccag
gaagagcttgcaagctttctgaaagagcggagtgatctgctgtggcttcatgagatatgc
ttaaaccagttctcatctgcttctgagacccttcatacctatgctctgcgtggtagtcct
gatggagatgctagcttcacaaccagcagaaagccactatcctttgttgaaagaagccgt
cttctttatctctctaaaattgctgcaacagcaggtaaggatattggttatgaggtgaag
gttgcacggatagaagcagacatgcggattctaaaactgcaggaagaaatagttcagcat
gatccagaatacgcacaagtaaaatatacaaacgcattgcttggtccatcagaactgatt
gagatgtgcttgaggagagaccgagagctctcctttaaagcttttgaagtatttgctttg
acaagctcatcattccgaagctccaacagaggtcttctagaggcatgctggatgaatgca
actgaccaggatgattgggtaaagctttcagaggcatccacgttagaaggttggagtgac
gaactcatcgaagaatctcttcaagcaactgtcctcttcaaagcttccaggttgtgttac
agcccggatgctgtggtgtatgatggcacctttgaggatgtgctgcctgtgaagaaagag
gatgtccatctgagaggtttggagagcaaatgcttgtcagttgaagaagtgctgatgcag
cacaaagattttccagatgctggtaaattgatgatgactgcagtgattttgggcaaggaa
ctaacttttacagccacagaacctgtggagatggactcataa
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