Sorghum bicolor (sorghum): 8085377
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Entry
8085377 CDS
T01086
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
KO
K11274
chromosome transmission fidelity protein 4
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbi03036
]
8085377
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
8085377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT140_1st
Ctf4_C
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
eIF2A
Beta-prop_WDR35_TULP_N
EIF3I
WD_LRWD1
Tricorn_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_ELP1_1st
CDC45
Motif
Other DBs
NCBI-GeneID:
8085377
NCBI-ProteinID:
XP_021304311
LinkDB
All DBs
Position
10:42293826..42299872
Genome browser
AA seq
998 aa
AA seq
DB search
MKGRVVKLREAHKAGSPALCSASWGPSGQHVVTASAADTAVLIHDAATVLAGGRGSGSSP
LATIRLHKDGVTALAVAPGPSGSLASGSMDHSIKFYTFPEGEFQSNVARFTLPIRSLAFN
KKGTLLAAAGDDDGIKLIATIDNTISKVLKGHKGSVTGLAFDPKNDYLASVDSFGTVIYW
DLCIGGEVRTLTRVAPTFRSDNSVRNVLCWSPDGQTLAVPGLRNNVVLYDRDTGEEVCTL
YGDHEQPVSSLCWSPNGRYLASAGLDRQVLIWDVKSRQDIERQKFDDRICSLAWKPNGNA
LLLIDVMGRVGIWESVIPSTMKSPNEGIPDLNSTKAPLFDDDDEDEDEEKPSTSGGLEDD
IDETLSDSTPFSHKRPRRKSTFDRDSDNEDLIHQMESTKRMKDKHNKKEDAGKARGDSAT
SARLVTARMQAAFQPGSTPPQPGMRNFLAYNMLGSITTIENEGHSHVEVDFHDTGRGPRV
PSMTDYFGFTMAAMNGSGSVFANQCKGDKNMSTLMYRPFGSWAGNSEWSMRFEGEEVKAV
ALGAGWVAAVTSLNFLRIFTEGGLQMHILSVSGPVVTAAGYEDQLAIVSHASDCLPSGDQ
VLDVKVFNISEGAQSMSGRLVLTPLSQLSWFGFSENGQLSSYDSKGILRVFSSQFGGSWL
PLFSSVKARKSEDESHWVVGLDANNIFCIVCKTPQSYPQVMPKPVLSILHLSFPLASSDL
GANSLENEFLMRKLQLSQIQNKMEEMTALGLDTTTYDDEAFNMEAGLDQCILRLISICCS
GDKLVRASELAKLLTLEKSMKGALTLVTRLKLPMLQEKFSSIIEERMLNNKIIAGTGGFC
SNATITTNTPVLTTQATVPSKFMQDGNSSLEFSLPKPNLVNQQCSSTEPKKSAGEQGIEI
KDSARKVSSAFIPSAKVPKSSETKKHRNGASNAAVVDQNQEGGIDHTGAKKMSTEYCNRA
EPQRPVNPFAKSSSSKEQSSSLLDSIKKMKVDKPNGRI
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggcgcgtggtgaagctccgtgaggcgcacaaggcaggctcgccggccctctgt
tccgcctcctggggccccagcgggcaacatgtcgtcaccgcttctgctgccgacactgcc
gtcctcatccacgacgccgccacggtgctcgccggcggccggggctcgggttcgtcgccg
ttggctactatccgtctccacaaagacggcgtcactgcactcgcagtcgcgccgggcccc
agcggctctctggcatcgggatccatggaccactccatcaagttctacaccttcccagag
ggggagttccagagcaatgtcgcccgattcaccctgccgattcgatcgctcgcctttaac
aaaaaaggcaccctgctggcggccgcaggcgacgacgacggcatcaagctgatcgcgacc
attgacaacaccatctcgaaggtgctcaagggacacaagggctccgtcactgggctggcg
ttcgacccgaagaacgattacctagcatccgtcgacagcttcggtaccgtcatctattgg
gatctttgcattggtggtgaggtccgtactttgacgcgtgttgctcccacatttcggtcg
gataactcggtcaggaatgttctgtgctggagccctgatggtcagacccttgctgtgcct
gggttgaggaacaatgtggtgctgtatgatagggacacaggggaggaggtgtgcacacta
tatggagatcatgaacaaccagtgagcagcctttgctggtctcccaatgggagatatctg
gccagtgctggcctggataggcaggtgctcatctgggatgtgaagtcaaggcaggacatc
gagaggcagaagtttgacgataggatatgcagcttggcttggaaaccaaatggaaatgct
ttacttctgattgatgtcatgggcagggttggcatttgggaatcagtcataccttcgact
atgaagtcacctaacgagggcatacctgatctcaactctactaaggctcctctatttgac
gatgatgacgaggacgaggacgaggagaagccaagtacctctggtggcttggaggatgat
attgatgaaactcttagtgattcaacacctttcagccacaagagaccaaggaggaagtcc
acattcgacagagatagtgataatgaggatttaatacatcaaatggaatcgaccaaaaga
atgaaagataagcataataaaaaagaggatgctggaaaggcaagaggtgattctgccact
tcagcaaggctagttactgcaagaatgcaagctgctttccagcctggctcaacaccacct
cagcctggcatgcgaaatttcctcgcttacaacatgcttggaagtattactactattgaa
aatgagggacattcacatgtggaggttgacttccatgacacaggaagaggacctagagtt
ccttccatgacagactattttggtttcacaatggctgcaatgaatggatcaggaagtgtg
tttgcaaatcaatgcaagggtgacaagaatatgagcactctaatgtaccgcccttttggt
agctgggctggtaacagtgagtggtcaatgagatttgagggggaagaagtgaaggctgtg
gctcttggtgctggatgggttgctgcagtcacaagcttaaattttttgcgcattttcacc
gaaggaggcttgcagatgcatatcctctcagtcagtggcccggttgttacagcagcaggt
tatgaagaccagctagctattgtgtcacatgcttctgattgtctgccctcaggggatcag
gtgctggatgttaaagtattcaacatatctgaaggggcacaatcaatgtctggtcgtctt
gttttgacaccattgtctcaattatcttggtttggattcagtgagaatggccaacttagt
tcatatgattccaagggaatactgagggttttttccagtcagttcggtggaagttggctt
ccattatttagttcggtgaaggcaagaaaatccgaagatgaaagccattgggtggtcggt
ttggatgcaaataatatattctgcattgtatgcaaaacccctcaatcttatccacaggta
atgcccaagcctgtgctaagcatacttcatctgtcatttccccttgcgtcatcagacctt
ggggctaatagtttggaaaatgagttcttgatgaggaagttacagctctcacagattcaa
aataaaatggaagaaatgactgctttgggccttgacaccaccacatatgatgatgaagca
ttcaacatggaggcaggacttgaccaatgcattttgaggctcatctctatctgctgcagt
ggtgataagctcgttcgagcttctgagcttgcaaaattattgacactagagaagtcaatg
aagggagcgctaacactagtgacccgcttgaaacttcccatgttgcaagagaagttcagc
tccataattgaggagaggatgttaaataataaaataatagctgggacaggaggattttgc
tccaatgctacaatcacgacgaatacaccagtgctgaccactcaggcaactgtaccttct
aagtttatgcaagatgggaacagttcgctggaattttcgttacccaaaccgaatcttgtc
aatcaacaatgcagttcaactgaaccaaagaagtcagcaggagaacaagggattgaaatt
aaggatagtgctcgaaaggtttcatctgcttttattccatctgccaaagtacctaaaagc
agtgaaacaaagaaacatagaaatggagcatccaatgcagctgtagtcgaccagaatcag
gaaggaggcattgatcatactggtgcaaaaaaaatgagcactgaatactgcaatcgagca
gagcctcagcggccagttaacccttttgcaaaatcatcttccagcaaagaacagtcatca
tcccttttggattccataaaaaaaatgaaagttgacaaacccaatggtagaatttga
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integrated database retrieval system
