Sorghum bicolor (sorghum): 8085582
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Entry
8085582 CDS
T01086
Name
(RefSeq) peroxisome biogenesis protein 7
KO
K13341
peroxin-7
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8085582
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_TEP1_C
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
8085582
NCBI-ProteinID:
XP_002451854
UniProt:
C5XYZ8
A0A921R5I1
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All DBs
Position
4:10186693..10188648
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AA seq
321 aa
AA seq
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MPAFKAPAPGFAVRFSPFHENRLLAATSQHFGLVGNGHLIVLDLAAAGPGPGAAPVPVFS
FPTSDALFDCAWSESHDSLCAAASGDGSVRLFDAALPPAQNPVRLLREHAREVHGLDWNP
VRRDAFISASWDDTLKLWSPDRPASVRTFRGHEYCVYAAAWSARHPDVFASASGDRTARV
WDVRDPAPTLILPAHDHEVLSLDWDKYDPSILATASVDKSIRVWDVRAPRAPIAQLAGHG
YAVKRVRFSPHRQGMLMSCSYDMTVCMWDYRAEDALLARYNHHTEFVAGIDMSVLVDGLL
ASTGWDEMVYVWPFGTDPRAM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgttcaaggccccggcgccgggcttcgccgtgcgcttcagccccttccacgag
aaccgcctcctcgccgccacgtcccagcacttcggcctcgtgggcaacggccacctcatc
gtcctcgacctcgccgccgccgggcccgggcccggggccgccccggtgccggtcttctcc
ttcccgacctccgacgcgctcttcgactgcgcgtggtccgagtcccacgactccctctgc
gccgccgcgtctggggacggctccgtgcgcctcttcgacgccgcgctcccgccggcgcag
aacccggtacgcctcctccgcgagcacgcgcgggaggtgcacggcctcgactggaacccc
gtccgccgggacgccttcatctccgcctcatgggacgacacgctcaagctctggtccccc
gaccgcccggcctccgtccgcaccttccggggccacgagtactgcgtctacgccgccgcc
tggtccgcgcgccacccggacgtcttcgcctccgcctccggggaccggaccgcgcgcgtc
tgggacgtccgggaccccgcgcccacgctcatcctgcccgcgcacgaccacgaggtgctc
tcgctcgactgggacaagtacgacccctccatcctcgccaccgcctccgtcgacaagtcc
atccgcgtctgggacgtgcgcgcgccgcgggcgcccatcgcgcagctcgctggacacggc
tacgccgtcaagcgggtccgcttctcgccgcaccgccagggcatgctcatgtcctgctcc
tacgacatgaccgtctgcatgtgggactaccgcgccgaggatgctctgctcgccaggtac
aaccaccacaccgagttcgtcgccggcattgacatgagtgtcctcgtcgacggcctgctc
gccagcaccggatgggacgagatggtctacgtctggccgtttgggaccgatccaagagcc
atgtag
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