Sorghum bicolor (sorghum): 8085620
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Entry
8085620 CDS
T01086
Name
(RefSeq) LOW QUALITY PROTEIN: putative pectinesterase 11
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00040
Pentose and glucuronate interconversions
sbi01100
Metabolic pathways
Module
sbi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8085620
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
8085620
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Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Motif
Other DBs
NCBI-GeneID:
8085620
NCBI-ProteinID:
XP_021317060
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All DBs
Position
5:complement(2422063..2425505)
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AA seq
343 aa
AA seq
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MWNTLCLQMTKTIGFYPNPLGELNGPHPNVSIRRLLFHIGLRDCSPPVVLVVDQSPGKGH
HTTIQAAINAVPANGGALIKISPGTYRKKVVVDKRGISLMGTGPNATSTIVTWRGQWSDT
SPSEFPLFVQGLASDFVAKRITFQNTWGTSHQAVAARVDGDKAAFYDCRFISYQDTLFDA
AGRHYYHGCYIEGATDFIFGNGKALYQSCHLHSTSDVGGAFTAQGREALSNNTGFSFVRC
DLTGXSPGKSVLGRPWRPYARVVFALCNMSNTVAPVGWIEWYVEIGTRPRNGXCMGYIYI
HGEGSRTEGRVPWAHNHLSPAEAQPFLTSNAWVDGQDWLRPQA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtggaatactttgtgcttgcaaatgacaaaaacaattgggttctacccaaacccgtta
ggagagcttaatgggccacaccccaacgtctccatccgacgtttattgtttcacatagga
ctgcgggactgctcgccgcctgtcgtcctcgttgttgaccagtcaccgggtaaaggtcat
cacaccaccatacaggcggcgatcaacgccgtccctgccaacggtggcgcgctcatcaag
atcagcccgggcacgtataggaaaaaagtggtggtggacaagaggggaatttctctgatg
ggcacgggcccaaacgccacctccaccatcgttacatggaggggacagtggagtgacacc
agcccgtctgagttccctctcttcgtgcaagggttagcctctgactttgttgccaagcgc
ataactttccagaacacgtgggggacgagtcaccaggcggttgctgcgagagttgacggg
gacaaagcggccttctacgactgcaggttcatatcataccaagacaccttgtttgatgca
gcagggcgtcactactatcatggatgctacatagaaggcgccacggatttcatattcggc
aatggaaaagccttataccagagctgccacctgcactccacctcagacgtcgggggagct
ttcacggcgcaggggcgggaagccttgtctaacaacaccggcttcagctttgtgaggtgc
gacctcacaggcnnaagccccggcaagtctgtcctgggccggccgtggcgaccgtacgcc
cgggtcgtgttcgccctctgcaacatgtctaacacagtcgcgcctgtgggctggatcgag
tggtacgtggagataggaactcgcccaaggaatggttgatgcatgggttatatatatata
cacggtgaaggatccaggacagagggccgagttccctgggcgcacaaccacctgtctcca
gctgaagctcaaccattccttaccagcaatgcttgggttgatggccaagattggcttcgc
cctcaggcgtag
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