KEGG   Sorghum bicolor (sorghum): 8085637
Entry
8085637           CDS       T01086                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03020  RNA polymerase
sbi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    8085637
  09124 Replication and repair
   03420 Nucleotide excision repair
    8085637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    8085637
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8085637
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     8085637
  RNA polymerase III system
   RNA polymerase III
     8085637
  RNA polymerase I system
   RNA polymerase I
     8085637
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      8085637
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N VMAP-M8 DnaT
Other DBs
NCBI-GeneID: 8085637
NCBI-ProteinID: XP_002450250
UniProt: C5Y4H1
LinkDB
Position
5:complement(2743361..2747205)
AA seq 317 aa
MTAAFFPSPSAAATTLSHPPTISTAWSICLPPNSLLSSSELRKKSGLPIETLVATGVEEE
KRGENSALTMDSAESTAAAAARAPNGAARAVDDYDDDDDAVPEVAACISAMLDLGGSVES
KRLFLARRTALEMLRDRGYAVPEDELARTLPEFRAWWEDKPELERLAFSTTLASDPSSKV
KVVFCPPEPVKIAAIRVVYTGVKDENLSRLILILQGRIMSKAREAIKEIFPYKVDTFQIT
ELLVNITKHALKPKHQVLTAEEKAKLLKEYNVVDSQLPRMLENDAVARYYGLGKGTVVKV
IYDSELTGNHVTYRCIF
NT seq 954 nt   +upstreamnt  +downstreamnt
atgacggccgccttcttcccctctccctcagctgctgccacgacactaagtcaccctccc
accatctccactgcttggtcgatctgccttccaccgaattcccttttaagctcgtcggaa
ttaagaaagaagagtgggttacctattgaaaccctagtcgccaccggagttgaggaggaa
aagcgtggggagaactcggcgctgaccatggactcggcggagagcacggccgccgccgcc
gcgcgcgcgcccaacggagccgcccgggccgtcgacgactacgacgacgacgacgatgcc
gtccccgaggtggccgcctgcatatcggcgatgctcgacctcgggggcagcgtggagagc
aagcgcctcttcctggcccgccgcacagcgctggagatgctccgcgaccgcgggtacgcc
gtcccggaggacgagctcgcccgcaccctcccggagttccgcgcctggtgggaagacaag
ccggagctcgaacgcctcgccttctccactaccctcgcctccgacccatccagcaaggtg
aaagttgtgttctgtccacctgaacctgtcaaaatcgcggctatccgggtggtatatact
ggagttaaagatgagaacttgtccagactgattctgatcctccagggcagaataatgtct
aaagccagagaagctatcaaggagatctttccatataaagttgacacgttccagatcacg
gaactactggtgaacatcactaagcatgccctcaagcccaagcatcaagtgttgactgct
gaggagaaagccaagctcctgaaggagtacaatgtggtggattcacagctgcctcgcatg
ctggagaatgatgctgttgctcgctattatggactaggcaagggaactgttgttaaagtt
atatacgacagcgagcttaccgggaaccatgtgacataccgatgcattttctaa

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