Sorghum bicolor (sorghum): 8085654
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Entry
8085654 CDS
T01086
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00061
Fatty acid biosynthesis
sbi00071
Fatty acid degradation
sbi01100
Metabolic pathways
sbi01212
Fatty acid metabolism
sbi04146
Peroxisome
Module
sbi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
8085654
00071 Fatty acid degradation
8085654
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8085654
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbi01004
]
8085654
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8085654
Enzymes [BR:
sbi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
8085654
Lipid biosynthesis proteins [BR:
sbi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
8085654
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of breast milk
8085654
Exosomal proteins of breast cancer cells
8085654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF3572
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
8085654
NCBI-ProteinID:
XP_021316435
LinkDB
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Position
5:complement(2947668..2959287)
Genome browser
AA seq
697 aa
AA seq
DB search
MARQEQEQDTMGAAHVRHQPPPPPPAGGCGLAANPVAAEYAHEQGYSVVLPEKLQTGKWN
VYRSAHSPLRLINKFPDNPEIGTLHDNFVYAVETFRDCRYLGTRISPDGTVGDYKWMTYG
EASTSRTAIGSGLIFHGIPEGARIGLYFINRPEWIILDHACAAYSYVSVPLYDTLGPDAV
QFIVNHATVEVIFCVPQTLSAILSFITQMPCVRLIVVVGGDDSNMPTVPATAECKIMTYN
RLHNEGRMSPQTFRPPKPEDIATICYTSGTTGTPKGAVLSHENLIANVAGSSLGVKFYPS
DVYISYLPLAHIYERANQVALLHYGVSIGFYQGDNLKLMDDLAALRPTIFASVPRLYNRI
YAAITNAVKESGGLRERLYHTAYNAKRHAMINGTNPSPMWDKLVFNKIKARLGGRMRLMT
SGASPLSPDVMEFLRICFGEVLEGYGMTETSCVISTMNIGDRSIGHVGSPNPSCEVKLVD
VPEMNYTSEDQPYPRGEICVRGPIIFCGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRL
KIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQCFIYGDSFNSFLVAIVAVEPEVLKA
WAASEGIEYEDLRQLCADPRARAAVLTDMDSIGKEAQLRGFEFAKAVALVAEPFTLDNGL
LTPTFKVKRQQAKAYFAKEISDMYAQLRETEVARSKL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcaggagcaggagcaggacacaatgggcgccgcccacgtccgtcaccagccg
ccgccgccgccgccggccgggggatgcggcctcgccgccaaccccgtcgccgccgagtac
gctcacgaacagggctacagtgttgtcctccctgagaagctgcaaactggaaaatggaat
gtgtacagatctgcacactcgcctctaagattaataaataaattccctgataatccggag
attggaacgttgcatgataattttgtatatgcagtcgaaactttccgagattgtagatat
ttgggtacaagaatctccccagatggaacagttggagactacaagtggatgacatatgga
gaagctagcacgagcagaactgcaataggttctggtcttatatttcacggaatacctgaa
ggtgcacgaattggtctatattttataaacagaccggagtggatcatacttgaccatgct
tgtgcggcatactcatatgtatctgtgccactttatgatactctcggtccagatgcagtt
cagtttatagtgaaccatgcaacagtagaagttatattctgtgtgccgcaaactctaagt
gctattttaagctttataactcaaatgccgtgtgttcgtcttattgtggtggttggtgga
gatgattcaaatatgccaactgtaccagcaactgctgaatgcaaaattatgacatacaac
agactacacaatgagggaaggatgagtcctcaaacttttcgtcctccaaaacctgaagat
atagctactatctgctacaccagtggcactactggcacaccaaagggagctgtactttct
catgagaacttaattgccaatgtagcagggtcaagtttaggcgttaagttttacccctct
gacgtgtacatctcatatctacctttggctcacatctatgagagggctaaccaggttgca
ttgcttcactatggtgtttccattggattctaccaaggggataacttaaagctgatggat
gatttggctgctttgaggccaacaatatttgcaagtgttccccgtttatataacagaatt
tatgctgcaattacaaatgctgtgaaggagtctgggggattgagagaaaggttgtaccat
actgcatacaatgccaagcgacatgctatgataaacggtacaaacccatcacctatgtgg
gacaagttggtatttaacaaaattaaagctagacttggcggacgaatgagacttatgact
tcaggcgcttctccattgtcacctgatgtcatggaatttctaagaatatgcttcggtgaa
gttcttgaagggtatggaatgacagagacatcttgtgtcatcagtacaatgaatattggt
gacagatcaattggacatgttggatctccaaatccttcttgtgaggttaaacttgtggac
gtcccagaaatgaattatacttcagaggatcaaccatatcctcgtggagaaatttgtgtt
agggggcctataatattctgcggttactataaagatgaagtccaaacaagagaggtcatt
gatgaggatggttggttacatactggagacataggtttgtggcttcctggagggcgtctg
aaaattatagataggaaaaagaacattttcaagttagctcaaggagaatacatagctcca
gagaagattgagaatgtctatgctaagtgcaagttcattgctcaatgctttatatatggt
gatagtttcaactctttcctagttgccattgtagcagtcgaaccggaggtgttgaaggct
tgggctgcatcagaaggaattgagtacgaggacttgagacagctctgtgctgatcctaga
gcaagagctgctgttctgactgatatggattccattgggaaggaagcacagctaagaggt
ttcgaatttgctaaagcggttgctcttgttgctgaaccattcacattggataatggtctc
ctgacaccaacattcaaggttaagagacagcaagctaaagcatattttgcgaaagaaatc
tcagatatgtatgcacagttgcgtgagacagaggtagctaggtcgaagttgtaa
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