Sorghum bicolor (sorghum): 8085756
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Entry
8085756 CDS
T01086
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8085756
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8085756
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
8085756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_4
PHD
Motif
Other DBs
NCBI-GeneID:
8085756
NCBI-ProteinID:
XP_021319727
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All DBs
Position
6:complement(7199312..7203776)
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AA seq
277 aa
AA seq
DB search
MSPRVVLLFLAAALRPCAALVRLHSATFSFTFLDAPARFGPRVGGDGICGSLRAAEPAEA
CEPIKDRGGRRGTGRKAFVLIARGNCSFEEKVRAAQQAGFDAAVVYDDEEKSSLYSMVGE
SEGIHIPAIFVSKMAGETLKKFARGEDDECCINSSMDETAGTVLVMSFVSLVVIISVLAS
FLFARNCRLLRHGVDNHPTYVKKYVVEKLPCSAYIAPCSSEDNFLEACAICLEDYNNGDM
LRHLPCKHGFHKICIDSWLTKWGTFCPICKLEVTSGE
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccgcgtggtcctcctcttcctcgccgccgccctccgcccctgcgccgccctc
gtccgccttcactccgccactttctccttcactttcctcgacgccccagcgcgatttggg
ccccgagtgggcggcgatgggatctgcggctcgctgcgcgccgctgagccggccgaggcg
tgtgagcccatcaaagaccgcggcggccgccgcggcactggccggaaggctttcgtgctg
atcgcgaggggcaactgcagctttgaggagaaggtgcgggcggcgcagcaagcggggttc
gacgccgccgtcgtgtacgacgatgaggagaaatccagcctctactccatggttggtgaa
tctgagggcatacacatacctgcgatattcgtttccaagatggctggcgaaacactaaag
aagtttgccaggggtgaagatgatgagtgctgtattaactcatcaatggatgagactgca
gggacagtgttggtaatgtcattcgtgtcacttgttgtcatcatatcagttcttgcttct
tttctgtttgctcgaaactgccgacttctacgccatggagttgataatcacccaacttac
gtcaagaaatatgtggtggaaaagcttccctgctcagcatacatcgctccctgttctagt
gaagataattttctggaagcttgtgcaatttgcttagaagactacaataatggtgatatg
cttagacatctcccatgcaaacatggatttcacaagatctgcattgattcctggctcaca
aaatggggcaccttctgccctatatgcaagcttgaagtaacgtcgggcgaatag
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