Sorghum bicolor (sorghum): 8086353
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Entry
8086353 CDS
T01086
Name
(RefSeq) protein HASTY 1
KO
K14289
exportin-5
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8086353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8086353
03036 Chromosome and associated proteins [BR:
sbi03036
]
8086353
Transfer RNA biogenesis [BR:
sbi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
8086353
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
8086353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
bPH_4
Motif
Other DBs
NCBI-GeneID:
8086353
NCBI-ProteinID:
XP_002457828
UniProt:
A0A921RCH8
C5XKI4
LinkDB
All DBs
Position
3:complement(19459651..19477839)
Genome browser
AA seq
1201 aa
AA seq
DB search
MAAEPAAAAAASAAAAISAVMDWRSSPDARAAAFAYLESVKSGDVRALASTSFLLVRKDQ
TSEIRLHGFKMLQHLVRLRWEELSAAERNEFANLTINLISDVVGPHEVWALKSQTAALVA
EVVRREGVDLWNTLLPSIVSLSNSGPIEAELVAMILRWLPEDITVHNEDLEGDRRRSLLR
GLTESLSQILPLLYSLLEKHFVAALSEHAKQQMDLAKQHAGTVTAVLNAVNAYAEWAPVT
DLAKYGLIHGCGSLLSYSDFRLHACEFFKVICQRKRPVDVAVAEYDAAMCNIFQVLMNIS
QQFLTRSGMQPSSIDESEYEFASCVCETMVALGSSNMQCILADGPRTFQFLQQMLEYYQH
YKIALHFQSLLFWLVVLREPSKAKSVARVSGDNSAAGNSASTGDLSTEKEKKGVSVFVTD
EMYSTILDVSFKRMLKNSGSATSGLLELWSEELEGKSDFCNYRTKLLDLIKVIASQRSVI
AAASVVQRINVVFGDANQATKSPQDLDAMEGAQLGLEAVVSAIFDGSFDCGKTDLETKSQ
LHKIFEGLLQQLLSLKWTEPNLAVIHGHYLDALGPFLKHYPDAVASVVNKLFELLTSLPI
TFQDPSNNSRLARLQICSSFIRISRAADKALLPHMKNIADTMAYLQGEGRLLRGEHNHLC
EAFLVMASSAGIQQQQEVLAWLLEPLNKMWTQVEWQTAYLSDPSGLTNMFADSQFMWSIY
HTVTFFEKALKRSGTKKSSAALQAPTTTVPGYLHPMSSHLAWIVPPLLRLLRCIHAFWSE
PFAQSQTGEIKAAKSMTVAEQASLLGETGKLTKGQVAPADGLLDVQRDGESKENNIKNWL
RGIRDSGYNVLGLAATLGEPFFRCIEGSSVTLALMENMQVMEFRHLRQLIHLVIIPFVKY
CPADLWHVWLVNLLQPLFVHCQQALNYSWSSLLHEGRAKVPDSIGNLPGSELKVEVMEEK
LLRDLTREVCSVLWALSSPGLNNGLPSLEQLGPSNRMDSVLKNLESFASSSLTGFLMLHI
GTALPALRISVEVFTWTDSEAVTKVIPFCGALIHLAIASNQAELRQFVAKDLFSSIIHGL
SVESNSVMSAELVGLCREIYVYLSDRDPAPRQVLLSLPHIKQEDLLAFDDSLSKTASPKE
QKQHMRSLLLLATGNKLRALVAQKTTNVITNVTTRNRSSTGHHGSSAEEDGHIGLAALSS
T
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaacccgccgctgcggccgctgcgtcggcggcggccgcgatctccgccgtg
atggactggcgctcatcccccgacgcccgcgccgccgccttcgcgtacctcgaatcggtt
aagagtggagacgtccgagccttggcaagcacatcgtttctcttggttcggaaggaccag
acgtcagagatccgcctgcacgggttcaagatgttgcagcacctggtaagattgaggtgg
gaggagctcagtgctgcagagcggaatgaatttgctaatttgacaattaatttgatatcg
gatgttgttggccctcatgaggtgtgggccttgaagagtcaaacagctgctttagtagca
gaggtagttcgaagggagggagttgatttgtggaatactttacttccatctattgtttct
ctctctaacagtggccctattgaggctgagttagttgccatgattctaaggtggcttcca
gaggatatcactgttcataatgaagatttggagggtgataggcggagatctctgttacgc
ggccttactgagtcactgtcacaaattctgcctctattatattctctacttgagaaacat
tttgttgctgctttaagtgagcatgcaaagcagcaaatggatttggctaaacaacatgca
gggacagtgacggcagttctaaatgctgtcaatgcatatgctgaatgggctcctgtgaca
gatctagccaaatatggtttaattcatggatgtggttccttgctttcttacagcgatttt
cgcctccatgcttgtgagttttttaaagtgatatgccagagaaaaagacctgtggatgtg
gcagttgctgagtatgatgctgcaatgtgcaacattttccaggtgttgatgaacatttca
caacaatttttgaccagatctggcatgcagcccagctctattgatgagagcgaatatgag
tttgcatcgtgtgtttgtgagacaatggttgctctagggtcttcaaacatgcaatgcata
ctagccgatggacccaggactttccagttcttacaacaaatgctggagtattaccaacat
tacaaaatcgcgcttcatttccagtctttattattttggctggtggtattgagagaacca
tcgaaagctaagtctgttgcacgtgtttctggtgataattctgctgctggtaattctgca
tctactggtgacttatcaacagaaaaggagaagaaaggtgtatcagtatttgtcactgat
gaaatgtacagtacaattttggatgtttctttcaagagaatgctcaagaacagtggaagt
gcaacttctgggttgttagaactatggagcgaagagcttgaggggaaaagtgacttctgc
aactaccgcaccaaattgttggatctcattaaagtcattgcttctcaaagatctgtgatt
gctgcagcaagtgttgtccagagaataaatgttgtctttggagatgctaatcaagcaact
aaatccccccaggatcttgacgcaatggaaggggctcaactggggcttgaagcagttgtc
agtgctatttttgatggctcatttgattgtggaaaaactgatttggagacgaaatcccaa
ctgcacaagatttttgaaggcttacttcaacagcttctttctttgaagtggacagaacct
aaccttgcagttattcatggtcattatttggatgctttgggccctttcttgaaacattat
ccagatgcagttgccagtgttgttaataagctttttgaactgttgacatctctcccaatc
acatttcaggatccatcaaacaattctcgcctagcaaggttgcagatctgctcatcattc
attcgtatatcgagagctgctgataaagctcttctgcctcatatgaagaacattgctgat
accatggcttaccttcaaggagagggccgcttactacgtggtgaacataatcatttatgt
gaagcatttcttgtgatggcgtcctctgctgggattcaacagcaacaagaagttcttgcc
tggttacttgaacctcttaataaaatgtggactcaagtggaatggcaaactgcatacttg
tctgacccttctggtttgacaaacatgtttgccgatagccaattcatgtggtcaatttat
cacacggttacattctttgaaaaggcgctcaagagaagtggaaccaaaaagtcttcagca
gctctacaagcacccaccacaacagtacctggttatctgcatccgatgtcttcacatctt
gcatggattgtgccccctctcttaaggctgctgcgatgcatacatgctttttggtctgag
ccatttgcccagtctcagacaggggaaatcaaagcagcaaaaagcatgactgttgcggag
caggccagccttctaggagagacagggaaacttaccaaaggtcaggttgctcctgctgat
ggattgctggatgttcagagagatggagaatcaaaagaaaacaatataaaaaactggttg
cgtgggatccgagacagcgggtacaatgttttaggattagcagctactcttggggaacca
ttctttcgatgcatagagggttcttctgtcacccttgctcttatggagaatatgcaagtt
atggagtttcggcatctgcgccaacttatccaccttgtcattattccatttgttaaatat
tgccctgccgatctatggcatgtatggctagtgaaccttttgcagccattatttgtccac
tgtcagcaagctcttaattattcatggtccagtcttcttcatgagggtcgggctaaggtt
cctgacagcattggtaatcttcctgggtcagaactgaaggtagaggtaatggaagaaaag
ttgctacgtgacttgactcgtgaagtatgttctgtgctttgggctttatcatcaccaggc
ttaaataatggacttccatccttggaacaacttggaccttctaaccggatggattctgtt
ctgaagaatctggagtcctttgcttcaagttctctaactggatttcttatgcttcatatt
ggcacagctcttcctgcattgaggatatcagttgaagtgttcacttggacagatagtgaa
gctgtgactaaagttatccccttttgtggtgctttgatccacctagccattgcttcaaac
caggctgagttgaggcagtttgttgcaaaggatttattttcctctataatacatggttta
tctgttgaatcaaattcagtcatgagtgctgaacttgttggactttgtcgggagatatat
gtctatctgtccgatagagatcctgcacctaggcaggttcttctttccctcccgcacata
aagcaggaagatttactagcatttgatgactctttgagtaaaactgctagtccaaaagag
caaaagcaacatatgcgaagcttacttctgctggctacagggaacaaactaagagccctt
gttgctcagaagacaactaatgtgattaccaatgttacaacacgaaataggagctctact
ggtcaccatggatcaagtgccgaagaagatggccatattgggttggccgcactatcatcg
acatga
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integrated database retrieval system
