Syngnathoides biaculeatus (alligator pipefish): 133490457
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Entry
133490457 CDS
T09681
Symbol
clip1b
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
133490457 (clip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133490457 (clip1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133490457 (clip1b)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
133490457 (clip1b)
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
133490457 (clip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
SlyX
Motif
Other DBs
NCBI-GeneID:
133490457
NCBI-ProteinID:
XP_061656529
LinkDB
All DBs
Position
17:20737415..20763074
Genome browser
AA seq
889 aa
AA seq
DB search
MEKAGAMSTAGKISGLKLPTKIGRPAVVAVKSASSSGTPKPLPASEKPGGGGGGGVISPD
QDGVPDFQIGERVWINGNKPGHVQFVGSTQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQC
DDGMGIFTRPSKLSRTPLPEKEANGGQAKVTQTGSEAAPVGTPSTGSVENLRNVPPGGRI
TGVLNRTVQSTESVTNLSDTDSVKKNKRELRRGDRVLVGGTKAGVVRFLGETDFAKGDWC
GVELDEPLGKNDGAVAGTRYFQCMPRYGLFAPVHKVTRIGFPCTTPTKARSSRRRSLLKR
SPSASSISSISSTASSVSGKPSRAGLLTETSARYARKISGTTALQEALKEKQQHIEQLLA
ERDLERCEVAKATSHAGEVQQELTLLRKGREQYALETEAKLDQLRSMVEAADRDKVELLN
QLEEERRKVEDLQFRVEEACITKGDLETQIRLEHGCIKELEQSLLFEKTKADKLQRDLED
TRVATVSERSRIMELEREVSDLQLRLRASLQKEDAASLSQQQLASLKAQAQSQEKKISEL
SVDLESKDKEFRSVQDDKDSLQQQLSALRTQLQQAEQEGARMAKAAQEAEQWKKDCQALK
DASQCREQELNSRLTQAVETSAGASLSLERLANEKAALETQLEALKQQNCKYQEELSLAQ
EGQHLARKDVEKISIEDSGAQDSSGLVANDKERELETLRSEVAALRCQNGAAETLRSAVT
ALERDKAQLSERVRDLERRLAGRAAPEDAERDEALAGDKALEKLKEEKEFAEGQINFLNS
VIVDLQRKNEELKVKLKKLALTDFIGNDGAEGAEPAESKRDKKAPPRPFCDICDRFDLHD
TEDCPTQAQSPDAVPHSSYRGHRDDERPYCEVCEVFGHATESCNDDRTF
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagcaggagccatgagtactgcgggcaaaattagcgggcttaagctgcccact
aaaataggccgtccggctgtcgtcgccgtcaagtccgcctcgtcctcaggaactccaaaa
cctcttccagcgtcggagaagcccggcggcggcggcggcggcggcgtcatctcccccgat
caggatggcgtcccggatttccagattggggagcgggtctggatcaacgggaacaagccc
ggccacgtccagttcgtgggcagcacgcagttcgccccgggccagtgggcgggcatcgtg
ctggacgagcccatcggcaagaacgacggctcggtggcgggcgtgcgctacttccagtgc
gacgacgggatggggattttcacgcggccctccaagctgtccaggacgcccctcccggaa
aaggaggccaacgggggtcaggccaaggtcacacaaactggaagcgaggccgcgcccgtc
gggaccccgtcaacggggagcgtcgaaaacctacggaacgttccccccggcgggaggata
accggcgtgttgaaccgaaccgtccaatccacggagtcggtgaccaacctgtctgacacg
gattccgtgaagaagaacaagcgggagctcaggagaggagatcgcgtcctggtagggggc
accaaggcgggagtggtgcgcttcctgggcgagacggacttcgccaaaggggattggtgc
ggcgtggagttggacgagcctctgggcaagaatgacggggcggtagcgggcaccaggtat
ttccagtgcatgccgcggtacggcctcttcgcccccgtccacaaggtgacgcgcatcggc
ttcccgtgcaccacgccgaccaaagcccggagctcccgccggaggtccctcctgaagagg
agcccgagcgcctcctccatcagctccatcagctccaccgcctcctccgtcagcggcaaa
cccagccgagcgggactgttgacggagacgtcggccaggtacgctcggaaaatctccggc
accacggcgctgcaggaggcgctcaaggagaagcagcagcacatcgagcagctgctagcc
gagcgcgacttggagcgctgcgaggtggccaaggccaccagccacgccggggaggtgcag
caggagctgaccctgctgaggaagggccgggaacagtacgccttggagacggaggccaag
ctggaccagctgaggtccatggtggaagcggccgaccgggacaaagtggagctgctcaac
cagctggaggaggagcgaaggaaagtggaagacctgcagttccgcgtggaggaggcgtgc
atcaccaaaggcgacctggagacgcagatccgcctggagcacggctgcattaaggagctt
gagcagagcctgctctttgaaaagaccaaagctgacaaactccagcgggatttagaggac
accagggtggcaacggtgtcggagcgttcgcgcatcatggagctggagcgcgaggtgtcg
gacctgcagctgcgcttgcgggcgtctctgcagaaggaggacgcggcgtcgctctcccag
cagcagctggccagcctcaaggcccaggcccagtcccaggagaagaagatcagcgagctg
agcgtggatctggaaagcaaagacaaggagtttcggtctgtgcaggatgataaggactcc
ctgcaacaacagttgagcgccttgagaactcagctgcagcaggccgagcaggagggcgcc
aggatggcgaaggcggcgcaagaagcggagcagtggaagaaggactgtcaggcgctgaaa
gatgcgagccagtgtcgagaacaagaactcaacagccggctgactcaggccgtggagact
tcggcgggggcgtcgctgtctctggagaggctggccaatgagaaggcggcgctggagacg
cagttggaagcgctgaagcagcagaattgcaaataccaagaggagctgagtctcgctcag
gaggggcagcacctcgcccgcaaggacgtagagaagatctccattgaggattcgggcgcg
caggactcgtcgggtctggtcgctaacgacaaggagcgcgagctggagacgctgaggagc
gaggtggcggcgctgcggtgccagaacggcgcggccgagacgctgcgttcggccgtgacc
gcgctggagcgcgacaaggctcagctgagcgagcgcgtccgcgacctggagcgacggctc
gcgggacgggcggcgccggaggacgccgagcgggacgaggcgctcgcaggcgacaaagct
ctggagaagctcaaggaggagaaagagttcgccgagggtcagatcaacttcctgaacagc
gtcatcgtcgacctgcagcgcaagaacgaagagctgaaggtcaaactgaagaagttggcc
ctgaccgacttcatcggcaatgacggcgcagaaggcgcggagccggcagagtccaagcgt
gacaagaaggccccgccgcggcccttctgcgacatctgcgaccgcttcgacctccacgac
acggaggactgccccacgcaggcgcagagccccgacgccgtgccgcactccagctaccgc
ggccaccgcgacgacgagcggccctactgcgaggtctgcgaggtcttcggtcacgccacg
gagtcctgcaacgacgaccgcaccttctag
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