Syngnathoides biaculeatus (alligator pipefish): 133490707
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Entry
133490707 CDS
T09681
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133490707 (sbno1)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133490707 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
BUD22
Motif
Other DBs
NCBI-GeneID:
133490707
NCBI-ProteinID:
XP_061657101
LinkDB
All DBs
Position
17:complement(20667029..20687976)
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AA seq
1409 aa
AA seq
DB search
MDPGQDLLLTALSESGICPNDIGLFDVDSQDVGQPSTTQQSISISALDVGLGTESGELVR
TESPSPGPVVTIRQHKPQPSTTTFVLNQLNQLPSLGAAVTKPSAGNPVKHTVTVTKVVHV
ANSALRGSSGPTSAGNPPSVSTAVPSNPDQIQLKDLLRAGSVKSSGMKGNSLVELMKLKP
PPDIATPVATATGPSEMNNGIKKENPAPKESVVRSWSNDELKLHAFSHSPNTPGMREEDE
PEEEEEEELGHAETYAEYMPMKLKVGLRHPDPVVETSSLSSVSPPDVWYRLTIPEEVIDR
GCLSALQLEAITYAAQQHETFLPSGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKRSL
WFSVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGE
SQSGGKYKTRFEQLLHWCGEDFDGVIIYDECHKAKNVCPIGSSKPTKTGLAVLELQNKLP
KARVVYASATGASEPRNMAYMNRLGIWGHKTPFKEFGNFIQAVERRGVGAMEIVAMDMKL
RGMYIARQLSFTGVTFKIEEVPLTQRYIHMYNKSVRLWVSAREKFQQAANLMDAEQRMKK
SMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVQNGKCVVIGLQSTGEARTLEALEEGG
GELNDFVSTAKGVLQSLVEKHFPAPDRQKLYTLLGIDLSTKKTPLASDSASQPQQKGKKR
KAPDSQKKTQQKKPRQHGGLSGTSSDESQSEESDKDSCRDGDSDDSFKSVSSADEDDDFN
PFRDESDGEDEDDPWLVRKEPKKSKEKKKKKKRRKSIDPDSIQSALLASGVGSTRPAFTA
PVAPPPTATAVKAEPEDSCLTSQDAVEHAQKMKRDLLEKLEELAEELPPNTLDELIDDLG
GPENVAEMTGRKGRVVSNDDGTITYESRSELDVPVEILNLTEKQRFMDGEKHIAIISEAA
SSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGE
QRFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVKLDSPLVS
PPSDFKGDFFKDVQRGLIGVGLINLEDRYNALSLDKDYNNIGKFLNRILGMEVHQQNALF
QYFSDTLAAVIQEAKRSGRFDMGILDLGSGDEKVKKLDCKKFLTPGYTASGHVELFTVSV
ERGMSWEEATHAWAEQNGADDGFYVQSRNNKKTAILVKEVNTKKRLFLVYRPNTGRQVKL
ETYAEIKKKFKKVLSEDAKQHWNEQHGSSAKICSHAFWRGNCRKASMGLQCEIGLRCRTY
YVLCGSVLSVWNELEEVLTPVSGTNVKVQIVRLRTEDGQRIVGLIIPANCVSPLMHKLST
SDQFQQLAVQEQHKRQQLHPQSLSHAANT
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggacaggatttacttctcactgctctcagcgagagcggcatttgcccaaac
gacatcggactgtttgacgtcgattctcaggatgtcgggcagccctccacaactcagcaa
tctatctcaatcagcgccctggacgtcggcttggggaccgagtccggggagcttgtccga
accgaatcgccgtctccaggccccgttgtgactatcaggcagcacaaacctcagccatcg
accaccacgtttgtcttaaatcagctcaatcagctaccgtcgctcggagcagccgtgacc
aagccgtcggccggcaaccccgtcaaacacacggtcaccgtcacaaaggtggtccacgtt
gccaattccgccctgcggggctcgtccgggcccacctccgcaggcaaccccccttcagtg
tccacagccgtgccttcaaaccccgaccagatccagttgaaagacctcctcagggcgggg
agcgtaaagagttcgggcatgaagggcaacagtctggtggagctcatgaagctcaagcca
ccgccggacattgccacacctgtagccaccgccacagggcccagtgaaatgaacaatggc
atcaaaaaggaaaaccccgcgccgaaggaaagtgtcgttagatcctggagcaacgacgag
ctcaaattgcacgctttttcacattccccgaacacgcccgggatgagggaggaggacgag
cctgaggaggaggaagaggaggagttgggtcatgcggagacgtacgccgagtacatgcca
atgaagttgaaagtcggcctgcggcatcccgacccagtagtggagaccagctccctgtcc
agcgtgagcccaccggacgtgtggtaccgcctgaccatcccggaggaggtgatcgatcgc
ggctgcctgtcagcgctgcagctggaagccatcacatacgccgcccaacaacacgagacg
ttcctgccgagcggcgaccgagcggcctacttgatcggcgacggcgccggtgtgggcaaa
ggccgcacgatcgccgggatcatctatgagaactacctcctaggcaggaagcgatcgctt
tggtttagcgtttccaatgacctgaagtatgacgctgaacgagatttgagggatattgga
gcaaagaacatccaagtccattctctgaacaagttcaagtacggcaaaatctcctccaag
cacaacggcagcgtgaagaaaggcgtcatcttcgccacgtactcatcgctgattggggag
agccagtcgggcggcaagtacaagaccaggttcgaacagctgctccactggtgcggcgag
gactttgatggtgtcattatctatgatgagtgtcacaaggcaaaaaatgtgtgccccatt
ggctcatccaaacccacaaaaaccggactggctgtgttggagcttcagaacaaactcccc
aaggctcgtgtggtgtatgccagtgctacaggtgcttcggaaccaagaaacatggcatac
atgaaccgcctgggcatctggggccataaaacgccttttaaggagtttggcaacttcatc
caggcggtcgagcgcaggggcgtgggtgccatggagatcgtcgccatggatatgaagctg
aggggaatgtacattgcgcggcagctgagtttcaccggtgtaacgttcaagatcgaggag
gttccgctgactcaacgctacattcacatgtacaacaagtctgtcaggctgtgggtgagc
gcccgtgagaagttccagcaggccgcaaacctgatggacgccgagcaacgcatgaagaag
tccatgtggggccagttctggtcggcccaccagaggttcttcaagtacctctgcatcgct
tccaaggtccgcagagtggtccagctagccagggaggaggtccagaacggaaaatgcgtt
gtgatcggccttcagtccactggtgaagcgagaactctggaggccttggaggaaggaggt
ggcgagcttaacgactttgtatcaactgcaaaaggtgtgctgcagtccctcgtggagaag
catttcccagctcccgacagacaaaaactttacacactgctgggcatagacctctcgaca
aagaagacccctctggccagtgactctgcatcccagccccagcaaaagggaaagaaaaga
aaagcaccggatagccagaaaaaaacgcagcagaagaagccccgccagcacgggggtctg
tcgggcaccagctctgacgagagccagtcggaggagtctgacaaggactcgtgcagggac
ggggacagcgacgacagcttcaagtcggtcagctcggcagacgaggacgacgatttcaac
ccgttcagagatgagtctgatggggaagacgaagatgatccctggcttgtccgaaaggag
cccaagaagagcaaagagaaaaagaagaaaaaaaagcgaaggaagagcatcgaccccgac
tccatccaaagtgccttgttggcgtcgggcgtgggctccaccagaccggccttcaccgca
cccgttgcccctccgcccactgcgactgcagtcaaggcagagcccgaagacagctgcctg
acgagtcaggacgccgtggaacacgctcagaaaatgaagcgggacctcctggagaaactg
gaggagttggccgaggagctgccgcccaacacgctggacgagctcatcgatgatctggga
ggacctgaaaatgtagcggagatgaccggtcgcaaaggccgcgtggtcagcaacgacgac
ggcaccataacgtacgagtctcgctctgagctggacgtgcccgtcgaaatcctcaacctg
actgagaagcagcgtttcatggatggggagaagcacatcgccatcatctccgaggcggcg
agctcgggcatttccctgcaggccgaccgccgggtcaagaaccagcgccgcagagtccac
atgacgctggagctgccgtggagcgccgaccgagccatccagcagttcggtagaactcac
aggtccaaccaggtgacagctcccgagtacgtcttcctcatctccgagctggccggcgag
cagagatttgcctcgatcgtggccaaaagattagaaagtcttggggcgctcacgcacgga
gacagacgagcaacggagactcgagatctcagcaggttcaattttgacaacaaatacggc
cgaaatgctctggaaattgtgatgaagtcgatagtgaagctcgactccccactcgtgtct
ccgccctcggactttaaaggagatttcttcaaagatgttcaaagaggcttgataggcgtg
ggcctcattaatttggaggacagatacaacgcgctgtcgctagacaaagactacaacaat
attgggaagttcctgaaccgaatcctcggcatggaggtccaccagcagaacgccttgttt
caatacttctcagacacgctggcggccgtcatccaggaagcgaagcggagcggcagattc
gacatgggcatcctggatctcggctccggcgacgagaaggtgaagaagctcgactgcaag
aagttcctgacgccaggctacacggcgtcgggccacgttgagctcttcacggtgagcgtg
gagcgagggatgtcctgggaggaagcgacgcacgcctgggctgagcagaacggagcggat
gatggattctacgtgcagtcgcggaacaacaaaaagacggccattctggtgaaggaggtg
aatacaaagaaaagactctttttggtctaccggccgaacacgggcaggcaggttaagctg
gagacgtacgctgaaatcaagaagaagtttaagaaggtcctgtcagaagacgccaagcag
cactggaacgagcagcacggctcgtcggcgaagatctgttcgcatgctttctggcggggc
aactgcaggaaagcgtcgatggggctgcagtgcgagatcggcctgcgctgccgcacgtac
tacgtgctgtgcggctcggtgctgagcgtgtggaacgagctggaggaggtgctcacgccc
gtcagcggcaccaacgtcaaggtgcagatcgtgcgcctgcgcacggaggacggccagcgg
atagtcggactgatcatcccggccaactgcgtgtcgccgctcatgcacaagctgtccacg
tcggaccagttccagcagctggctgtgcaggagcagcacaagcggcagcagctgcacccc
caaagcctgagccacgcggccaacacatag
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integrated database retrieval system
