Syngnathoides biaculeatus (alligator pipefish): 133490829
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Entry
133490829 CDS
T09681
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133490829 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133490829 (prpf38a)
Spliceosome [BR:
sbia03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
133490829 (prpf38a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
GIP4
Motif
Other DBs
NCBI-GeneID:
133490829
NCBI-ProteinID:
XP_061657358
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All DBs
Position
17:23855789..23858179
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AA seq
309 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYECKYWKEECFGLTAELVVDKAMELKYVGGV
FGGNIKPTPFLCLALKLLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTAVDCYKYL
EPLYNDYRKIKTQNRNGEFELMHVDEFIHELLHSERMCDIILPRLQKRQVLEEAEMLEPR
VSALEEDLDEAESSEDDEDEDERAERIPSPEPHRRAYRDDRPRRSPSPRRRRSRSPRRRS
RSPKARRSPADGRREKRRSKSPPRRPHRERRRRSKSPAAHHRSHRHRSHSKSPDKSSKKS
HKKSRRGNQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaggaccgtgaaagacgccaacagcatccacgggacgaacccgcagtacctg
gtcgagaagatcatccgcactcgcatttacgagtgcaagtactggaaggaggaatgcttc
gggctgacggccgagcttgtggtggacaaagccatggagctcaagtacgtgggcggcgtg
ttcgggggcaacatcaagcccacgccgttcttgtgcctcgccctcaagctgctgcagatc
caacccgagaaagacatcatcgtggagttcatcaagaacgaggacttcaagtacgtgcgc
cttctcggcgccatgtacatgcgcttgacgggcacggccgtggactgctacaagtacctc
gagccgctctacaacgactacaggaagatcaagacccagaaccgcaacggcgagtttgag
ctgatgcacgtggacgagttcatccacgagctgctccactctgagaggatgtgcgacatc
atcctgccgcggctccagaagaggcaagtcctggaggaggccgagatgctggagccccgg
gtcagcgctctggaggaagacctggacgaggcggagagcagcgaggacgacgaggacgag
gacgagcgggccgaaaggatccccagccccgaacctcaccgccgggcctaccgcgacgac
aggccccgccgctcgccgtcgccccgccggcgccggagccgctcgcccaggcgcaggagc
cgctcgcccaaggccagacgcagccccgccgacggccgcagggagaagcgccgcagcaaa
agccccccgcggcgcccgcaccgggagcgcagacggcgctccaaatcgccggcggcccac
cacaggagccaccggcaccgcagccactccaagagccccgacaagagctccaagaagagc
cacaagaagagtcgcagggggaaccagtga
DBGET
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