Syngnathoides biaculeatus (alligator pipefish): 133490869
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Entry
133490869 CDS
T09681
Symbol
itga1
Name
(RefSeq) integrin alpha-1 isoform X1
KO
K06480
integrin alpha 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
sbia04810
Regulation of actin cytoskeleton
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133490869 (itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133490869 (itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133490869 (itga1)
04810 Regulation of actin cytoskeleton
133490869 (itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133490869 (itga1)
04515 Cell adhesion molecules [BR:
sbia04515
]
133490869 (itga1)
04090 CD molecules [BR:
sbia04090
]
133490869 (itga1)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133490869 (itga1)
Cell adhesion molecules [BR:
sbia04515
]
Integrins
Integrin alpha subunits
133490869 (itga1)
CD molecules [BR:
sbia04090
]
Proteins
133490869 (itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Integrin_alpha
DUF1775
Motif
Other DBs
NCBI-GeneID:
133490869
NCBI-ProteinID:
XP_061657438
LinkDB
All DBs
Position
17:17546490..17602848
Genome browser
AA seq
1185 aa
AA seq
DB search
MPVTSNCLLATAALAVLLVCVLSFNVDQKNSLSFDGPLEDMFGYTVQQFSNSEGKWVLIG
SPLSGQPTKRTGDVYKCPVRTGNSTCVKLQLPENTSVPNLHEVKENMTMGTTLVTNPSGG
FLACGPQYGYMCGQQQYISGVCANVSSSFEVLSSVAPGVQECAKEMDIVIVLDGSNSIYP
WSSIIDFLVRFIENIQIGPKLSQVGIVSYGETVTHRVNLSQFDNTAALLDFVHELPQQTG
FRTMTFLGIDTARREAFMPERGARPGVKKVMVIVTDGESHDFHNLKTVIGDCEEDGIERF
GIAVLGDYNRQNKTAEEVQKFINEIASISSQPLRDHFFNVSDEVALLTIVDALGSKIFAL
EATTGNFTSSFDMEMSQAGFSAHAYKDGLLLGAVGAYDWNGTVIINDDEGSIYPDKNHFF
DPESEAGYERLAGYLGYDVQSASTPDGILYITGAPRYNHTGRVVVYRLKDRDVVVSQTLR
GEQIGSYFGSVLQTLDVDGDSYTDLLLVGAPMFMGSDRDEQGQVYVYKLKQDGHFAHQFT
LKPVNQSCCSVSSSGCTHKNEPCGARFGTAIAAVSDLNLDGFNDVAIGAPFENDHRGGVY
IYHGDSKRSLKEKFVQHIPAGGNDDKMKFFGQSIHGVMDLNGDGITDVTIGGLGGASLFW
SRDVAELRANMTFDPAKINVQQAQYQCEHLGRKSVCVTTNVCFVYTVKSNKQDLKTKAVI
RYDLTLDALRAKARASFLNSDDKSDRRISRTVAVEDRLRTCATEVFMMSARLDFRDPLMV
SLDFGLVNKDQGPALDESLPTSINKTIPLVDCGNDQRCIADLSLQAETSVTGLVIRAKKD
KLDVNIRVRNSKDNAYNTKVVVSFTPNINYVKVEPDKDCTLNHTKVECAVGYPFLGTNIE
EAFKVKFEVNPNHIHHNIQINVTATSDSEELASTLGDNTVHISIPVKYEAGIVFTVRPVD
EHVVVKEGEQYLSVFNDTRMIGEELNISYTVEKAGDTVTPPLDLKVTYPGLSPRNNYLLY
LTHVITSPQMQCDADALINPLNLNPNIVKPNPNRETLSVFLLSCDNLPCASFKCFIPEAK
ISQVNVTFRVWKPTFIKADFSSLHMLVNATLESRNTGLFVLSTGDSTRTVKIQVSKESSG
GIPIWIIIISILIGLLILALVIFALWKMGFFKRKSPELSKEEMMD
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgacttcaaattgccttctcgcaacagccgcgctcgctgtgttgctcgtgtgt
gtgttgtccttcaacgtggaccagaagaatagcctgtctttcgacggcccgctggaggac
atgtttggttacacagtccagcagttttcaaacagcgagggcaaatgggttctgatcgga
tcgccactgtcggggcagccgacaaaacgtacgggcgacgtctacaagtgtcctgtgagg
acgggcaacagcacatgtgttaaactgcagcttccagaaaacaccagcgttcccaattta
cacgaagtcaaggagaacatgaccatgggaaccacgctcgtgaccaatcccagcgggggt
ttcttggcgtgtggtccgcaatacggttacatgtgcggtcagcagcagtacatctctggg
gtttgcgccaacgtcagttcgtccttcgaagttctcagctcggtggcaccgggcgttcaa
gaatgcgccaaggagatggacatcgtgattgtcctggacggctccaacagcatctacccg
tggagcagcattatcgacttcctggtccgcttcatcgagaacattcaaatcggacccaaa
ctctcacaagtgggtattgtgtcctacggcgagacggtgacccaccgtgttaacctgagc
cagttcgacaatactgccgcgctgctggatttcgtacacgagctcccgcagcagaccggc
ttcagaacaatgactttcctgggcattgacactgccaggagggaggcgttcatgccggag
cgaggcgcgaggcccggcgtgaagaaagtgatggtgatcgtgaccgatggagaatcgcat
gatttccacaacctcaaaacggtcatcggcgactgcgaggaggatggcatcgagaggttt
ggcatcgctgttctgggagactacaaccgacagaacaagaccgctgaggaagtgcagaaa
tttatcaatgagattgcgtccatctccagtcagccactgcgtgatcacttctttaacgtg
tcagatgaggtggcgctgttgaccatcgtggacgcgctaggcagcaagatctttgccctc
gaagcaacgaccgggaatttcacctcgtcattcgacatggaaatgtcgcaagctgggttt
agtgctcacgcttacaaagacggcttgctactgggagcagtgggagcgtacgactggaac
ggcactgtgatcatcaacgacgacgagggatccatttatccggacaaaaaccacttcttc
gaccctgaaagcgaagccgggtatgaaagactggccggctatctcggttacgacgtccag
tcggcgtccacccccgatggcatcctgtacatcacgggggcgccgcggtacaaccacacg
ggccgtgtcgtcgtctaccggctgaaggacagggacgttgtcgtctcgcagacgctcaga
ggggaacagatcggttcgtatttcggcagcgtgctgcagactctggacgtggacggggac
tcatacacggacctcctgttggtgggggcgcccatgttcatggggtccgacagagacgaa
cagggccaagtgtacgtctacaagctcaagcaggacggccactttgcccaccaattcaca
ctgaagccggtcaaccagtcatgctgcagcgtcagctcgtccggctgcacgcacaaaaac
gagccgtgcggcgcccgtttcggcacggccatcgccgccgtgtccgacctcaacctggac
ggcttcaacgacgtggccattggggcgcccttcgagaacgaccaccgagggggcgtgtac
atctaccacggggacagcaagcgatcgctgaaagagaagtttgtgcagcacatcccggcg
ggtggaaatgatgacaagatgaagttctttggtcagtccatacatggagtcatggatctc
aatggagacgggatcaccgatgtgactatcgggggactcggaggggcctcgttgttctgg
tccagagacgtggcggagctccgcgccaacatgactttcgacccggccaagatcaacgtg
cagcaggcccagtaccagtgcgaacacctgggacgcaaatccgtgtgcgttaccacgaac
gtgtgtttcgtctacaccgtcaaatccaacaagcaggatctgaagaccaaagcggtgatt
cgttacgacctgactctggatgctctccgggcgaaagccagggcttcttttctcaactcg
gacgacaagagcgaccggcggatttccagaacggttgctgtggaggaccgactgaggact
tgcgcaacggaggtgttcatgatgtcggctcgactggacttccgtgaccctctcatggtg
tcgctggactttggactggtcaacaaagaccaaggcccggcactggatgaaagcctgccc
acgtccattaacaaaacgattcccttggtagactgcggcaacgaccagcggtgcatcgct
gacctctccctgcaagccgagaccagcgtgacaggcttggtgatccgagccaagaaggac
aaactggacgtgaacatccgggtgagaaacagcaaagacaacgcctacaacaccaaagtg
gtcgtcagcttcacgccaaacatcaactacgtcaaagtggagccggacaaggactgcact
ctgaatcacaccaaagtggaatgtgcggtggggtaccccttcctggggaccaacattgag
gaagctttcaaggtaaagttcgaggtgaaccccaatcacatccatcacaacatccagatc
aacgtgacagccacaagcgatagcgaagagcttgcctccaccctgggcgacaacacggtg
cacatctccatccccgtcaagtacgaggccggcatcgtgttcactgtgcgtccagtggac
gagcatgtggtggtgaaagagggcgagcagtacttgagtgtgttcaacgacacccgcatg
atcggcgaggagctcaacataagctatacggtggagaaagcaggtgacacggtgactcct
ccccttgatctgaaggtgacctatcccgggctgtcacctcgtaacaattacctgctgtac
ctgactcacgtcatcaccagcccgcagatgcaatgtgacgcggacgctttgatcaaccct
cttaatctcaacccgaacatcgtaaaacccaatccaaacagggaaacgctcagcgtcttt
cttctgagctgcgacaaccttccgtgcgcctcgttcaaatgcttcatcccggaggccaaa
atcagtcaggtcaatgtcaccttcagagtatggaagcccacattcatcaaggcagacttt
tccagtctgcacatgcttgtgaacgccaccctggagagcagaaacacgggtctgtttgtg
ctgagcaccggtgacagcaccagaactgttaagatccaagtctccaaggagagctcaggg
gggatcccaatatggatcatcatcatcagcatccttataggtcttctcattttagcacta
gtcatcttcgctctgtggaagatgggcttcttcaagcgaaaatccccagagttgtccaag
gaggaaatgatggattga
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integrated database retrieval system
