Syngnathoides biaculeatus (alligator pipefish): 133490911
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Entry
133490911 CDS
T09681
Symbol
tmc2a
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 2-A
KO
K21988
transmembrane channel-like protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbia02000
]
133490911 (tmc2a)
03037 Cilium and associated proteins [BR:
sbia03037
]
133490911 (tmc2a)
Transporters [BR:
sbia02000
]
Other transporters
Pores ion channels [TC:
1
]
133490911 (tmc2a)
Cilium and associated proteins [BR:
sbia03037
]
Other cilia and associated proteins
Stereociliary proteins
133490911 (tmc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Arc_capsid_dom
Motif
Other DBs
NCBI-GeneID:
133490911
NCBI-ProteinID:
XP_061657590
LinkDB
All DBs
Position
17:6331231..6347178
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AA seq
813 aa
AA seq
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MKGGKEEDDSQVKKGDATGNDKKKKKEERXAEYPSILGSSCSYSSDTSSSSDEDEESLSE
GEMAVLMEEVEEKKKLISTIRNKPWRMKRRLTHLKEAQDFVDKFEGALGKGKGRKWYAYK
VMMTKKWIKFQRDFENFKTACIPWERKIKEVESHFGSSVASYFIFLRWMYGMNLVMFGFT
FGLVVIPEVLMGLPYGSIPRKTVPRAEQATAQDYSVLMDFNGYCKYSILFYGYYNSQRTI
GLLKFRLPLAYLMVGIGTFGYSLMVVIRTMAKNADLGGGDGEDGEFTFAWKMFTSWDYLI
GNAETADNKYASITTSFKESIVDEQENQKDENIHLRRFLRVLANVLITCSLGGSGYLIYF
VVKRSQDFANRDDLSWYEKNELEIIMSLLGLLCPPLFETIAELEDYHPRIALKWQLGRIF
ALLLGNLYTFLFALFDEVNTKLEEEQSIKNATILALKEYYANYTRLVNDTEVTPPPMNPA
DVIRGPCWETAVGIEFVKLTVSDIQVTYLTILIGDFARAVIVRFLNYCWCWDLEAGFPSY
GEFDISGNVLGLVFNQGMIWMGAFYAPGLVGINVLRLLTSMYYQCWAVMATNVPHERVFK
ASKSNNFYMGLLLLILFLSLLPVVYTIMTLPPSFDCGPFSGKAKMFDVIIETIDLDLPAF
MGTLFSYVANPGLIIPAVLLMVLAIYYLNSVSEAYKNSNLDLKKKMQMARDEEKNRRNNT
DSTNEVMKDLEDLLPNRSLAPPAPLPEPEKTSDPKPVKTKPGAAGKGVHLQRDVALAASN
PAIRGPIVQPPAPRGPGTMSGPGRGRGRGPPPR
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaggaaaggaggaggatgatagtcaagtcaagaagggagatgccacgggaaat
gacaagaagaagaagaaggaagaaaggtaggctgaatatccatccattttaggaagcagt
tgttcttattcatcagacaccagttcaagctcagatgaggatgaggaatccttgtcagag
ggagagatggctgtgctgatggaggaggtggaagagaagaagaaattgatctcaacaatc
aggaacaaaccgtggaggatgaagagaagactcacacacctcaaagaagctcaagatttt
gtggataaatttgaaggcgctcttggcaaaggaaaaggcaggaagtggtatgcctacaaa
gtaatgatgacaaagaaatggattaagttccagagggactttgaaaatttcaaaacagcg
tgtattccctgggagaggaaaatcaaagaagtggaaagtcactttgggtcatctgtagct
tcctacttcatcttcctacgctggatgtacgggatgaacctcgttatgttcggtttcact
ttcgggctggtggtcattcctgaggttctgatgggccttccttatgggtccattcccaga
aaaactgttcccagagcagaacaggctactgctcaggactactctgtcctcatggatttc
aatggatactgcaagtactccatcctgttctacggctattacaacagtcagaggaccatt
ggcctgctgaagtttaggctccctctcgcctaccttatggttgggattggaacatttggg
tacagcttgatggttgtgatccgcacaatggcaaagaatgcagacctaggtggtggagat
ggagaggacggggagttcacctttgcctggaaaatgttcaccagttgggattatctcatt
ggaaatgcagagactgcagacaacaagtatgcatctatcaccaccagcttcaaggagtcc
attgtggatgagcaagagaaccagaaagatgagaacattcatctgaggaggttcctcagg
gtcctggctaatgtcctcattacttgcagcctcggaggaagtggatacctcatctacttt
gttgtaaagaggtctcaagattttgccaatagagacgatctcagctggtatgagaaaaat
gagttggagatcatcatgtctctgctgggccttttgtgtccacctctgtttgagacgatt
gctgagctggaggactatcatccccggattgccctcaagtggcagctgggacgcatcttt
gctcttttgctgggaaacctctacacattcctgtttgccctctttgatgaagtcaacacc
aagctggaagaagagcagtccataaagaacgccaccatattggccctgaaggaatactac
gccaactacacacgcctggtcaacgacacagaagtcactccacctcccatgaacccagct
gatgtcatcagaggaccttgctgggaaaccgctgttggcattgagtttgtgaagctgact
gtatcggacatccaagtcacctacctgaccatcctgattggtgactttgccagagctgtt
attgtacgctttctcaattactgttggtgttgggacctggaggctggatttccatcatat
ggagagtttgatatcagtggtaatgttttgggacttgtcttcaatcaaggcatgatctgg
atgggagcattttatgctcccggtctggttggcatcaacgtgctccgcctgctcacgtcc
atgtactatcagtgttgggctgtgatggcaactaatgtccctcatgagagagtcttcaag
gcttctaagtccaacaacttctacatgggtctgctgctcctcatccttttcctcagtttg
ttgcctgtggtctacaccatcatgaccctcccaccctcctttgattgtggccccttcagt
gggaaggcaaagatgtttgatgtgatcattgagacgatcgatctagacctgccagccttc
atggggacactttttagttatgtagccaacccaggcctcatcataccagctgttttgctc
atggtgcttgccatctactatttgaactctgtttcagaggcatacaaaaactccaacttg
gatctgaaaaagaagatgcagatggctcgcgatgaagaaaagaaccggcggaacaacaca
gacagcaccaacgaggttatgaaagacttggaggatctgctgccaaaccgctctctggca
cctcctgctccactaccagagcctgaaaagacatcagatccaaagccagtgaagactaaa
cctggggcagctgggaaaggtgttcaccttcagagagatgtggcacttgcagcatccaat
cccgccattcgagggccaatagtccaaccacctgcaccaagagggccgggaacaatgtcc
ggtcctggccgaggccgtggaagaggacctcctccgagatga
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