Syngnathoides biaculeatus (alligator pipefish): 133490919
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Entry
133490919 CDS
T09681
Symbol
lrsam1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1 isoform X1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133490919 (lrsam1)
04121 Ubiquitin system [BR:
sbia04121
]
133490919 (lrsam1)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133490919 (lrsam1)
Membrane trafficking [BR:
sbia04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
133490919 (lrsam1)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133490919 (lrsam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
zf-C3HC4_3
LRR_4
LRR_1
SAM_1
Prok-RING_4
SAM_2
zf-RING_2
Goodbye
Motif
Other DBs
NCBI-GeneID:
133490919
NCBI-ProteinID:
XP_061657613
LinkDB
All DBs
Position
17:3726726..3767637
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AA seq
733 aa
AA seq
DB search
MPLFFRKKKPSDDSKKRLEYQLCRAKEAGAEDILDISSCELSEVPSSAFSICKILQKKVL
ILHSNDLKSLLPKGSDILSLGSLKVLDLHDNKLHSLPENIGKLTSLQILNVEKNRLKVLP
ESIGNLGLLQTLNLKGNCLGELPSTISSLSSLRTLDVSDNLIVQIPKSFAYIRTLENFIV
DAASMTYPPASVCVEGTATIQQFLCSELGEEYCPPSQYLLPVLECDGGKQNSDCVDGVDE
AWQNKFSDYEKRKFQKQQEKLAFERHREEKLNEHTQLLLMNTSRKEDILNSVRQEQERLE
QGVTQQQRAQESERLLLLDKVRHAEYDISSRISNMLLDNSRQKKSAEFLQAMEEDRIRME
HLTSITQEEANSLRKREVATAMQKMLSDSCAVSLLQEASDSRRKSLVSEAYRSMETLEKK
FDKMLSIQVLDKSKAIAQILQEEEMQKAAFQALQLQKDSVHGYIRNQIKLIEGELMQLTK
LEVKRKTLDAENLQEVLVDQRTALGHMLQQLLKQKHQREQELLQVLVELESKSESTQQNY
WMIQYQRLLDAKPLSLRMQEVGVEKELVNILCKLSAQHYLPIIAHNRVTMEALRQMNPSD
LKELGIIEVGVQKAILNWAQECNPEGASKVIDQSKEEVPPPEPSSSFFPSGSYTSSILTP
SPPLTPGTPVTPSAPSPVEGPGSSECVVCMETGAQVIFLPCGHVCCCQVCSDALQNCPLC
RGTISQRIRLYHS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgtttttccgaaagaagaaacccagtgatgattccaagaagagacttgaatat
cagctgtgtcgggcaaaggaagcaggtgctgaggacatcctggacatctcgtcttgtgag
ctttctgaggttccttcaagtgccttttcgatttgcaaaattctccagaagaaggtactg
atactgcacagcaatgatctcaaatcgctgcttcccaaaggaagtgacattctctccctt
ggcagtctaaaggttttggatttgcatgataataagcttcattcacttccagaaaacatc
gggaagctgacatctctgcagattttgaatgtggagaagaatcgtttaaaggtccttccg
gaatccattgggaatcttgggctactgcagacactcaatttgaaaggcaactgtcttggt
gaactaccatcgacaattagctctctgtccagtttacgtaccctggatgtgagtgacaac
ctcatagtccagattcccaaaagctttgcttatatccgcacactggagaacttcatagta
gatgcagcttcaatgacctatcctcctgcatctgtatgtgtggaaggtacagcgacaatt
cagcaattcctgtgcagtgagctgggagaagagtactgccctccatcccagtatctcctg
ccagttctggaatgtgacggtggcaaacaaaactctgactgtgtggatggtgtggatgag
gcctggcagaataaattcagtgactatgagaagagaaagtttcagaagcagcaggaaaag
ttggcctttgagcgacaccgagaggagaaactaaatgagcacacccagcttctactcatg
aacacctctcgtaaagaagacatcctcaactcagtccgtcaggaacaggaacgcctggag
caaggggtcacacagcagcagcgggcccaggagtctgaaaggttgctgttgttagacaaa
gtgagacacgctgaatacgacatcagcagtcgaatcagcaacatgctgttggataacagc
aggcaaaaaaagagtgctgagtttctccaggccatggaggaagatcggatccgtatggag
catctgacttccatcacacaggaagaagctaactctctgaggaagagagaagttgccacg
gccatgcaaaagatgctgtcagacagctgcgctgtgagcctcctccaagaggccagtgat
tcacgtagaaagagcctcgtgtctgaggcttacagaagtatggagactctggagaagaag
tttgacaagatgttatccattcaagttttggacaaatctaaagccattgcccagatttta
caggaggaggagatgcagaaagctgcgttccaagcactgcagctgcagaaagattctgtc
catggttacatccggaaccagatcaagctaattgagggtgaattaatgcagctgacaaaa
ttggaagttaaaagaaagactctggatgcagagaacctgcaggaagtgctagtggaccag
cgtacagctctaggtcatatgttgcagcaactgctgaaacagaagcaccagagagagcaa
gaactgctgcaagttctggtggagctggagtcgaagtcagagtccacacagcaaaattac
tggatgattcagtaccagagactgttggatgccaagcccttgtccctgcgcatgcaggaa
gttggtgtggaaaaagagttagtaaatatactctgcaaactgtcagctcagcattacttg
cccatcattgctcataatcgtgtcacaatggaagcccttcgccagatgaacccatccgac
ctcaaggagcttggcattattgaagtcggcgtccagaaagcaattttgaactgggctcaa
gaatgtaatcctgaaggtgcctcaaaggtgattgaccagagcaaagaagaagtcccccct
ccagaaccgtcctcttccttttttccctcaggttcatacacctcgagcatcttgacccca
agcccaccactcacccccggtacccctgttacaccatcagccccaagtccagtggaggga
ccagggagctccgaatgtgtggtctgcatggagacaggggctcaagtcatctttctgcca
tgtggccatgtttgctgttgtcaggtctgtagtgacgccctgcagaactgccctctatgt
cgaggcaccatatcacaacgcattcgactttaccacagctag
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