Syngnathoides biaculeatus (alligator pipefish): 133490970
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Entry
133490970 CDS
T09681
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133490970
Membrane trafficking [BR:
sbia04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
133490970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
Motif
Other DBs
NCBI-GeneID:
133490970
NCBI-ProteinID:
XP_061657710
LinkDB
All DBs
Position
17:12477915..12556280
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AA seq
1082 aa
AA seq
DB search
MDDKGSVGKISVSSDSVSTLNSEDFVLVSRLGDETPSSTNNGSDDEKTGLKVISQEGVSF
KIVGNGSEQQLQKELEDVLMEPSLADARPAALVNAGDLALPPTTASPVAPDTDPLSGQPP
KVEMVLPVQTAQESELNERSYRGGESSSDGSPGSPIPDDDSVVFSQLTYLGCASVNAPRS
EGEALRMMSILRGQCQLPLDVTLSVPGVSEGTVRLLDPNNSTEIANYPIYKILFCVRGHD
GTPESDCFAFTESHYNAEIFRIHVFRCQIQEAVSRILYSFATAFRRSAKKAAVACQQSAP
LTPDSDLFIFTVSLEIKEDDGKGTFSAVAKDKDKQTFKLRAGMDKKIVIYIQQTSNKELA
IERCFGLLLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITGSWTPSTPQFQAVNEETPKD
KFMYMTTAVDLVITEVEEPVRFLLETRVRVCSPNDRLFWPFSKRSHTETFYLKLRQMERK
ERKSPSSDTLYEVVSLESETERAKRKTTASPGILSGGVPSPPEDDEEEDNDEPLLSGSGD
VSKECAEKILETWGDLLSKWHMNLCVRPRQLPTLVRSGIPEALRGEVWQLLSGCHNNDHQ
VEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYC
QGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRDLFKQNFEDLHCKFFQLERLMQECIPD
LYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALALLKTSK
DDLIQTDFEGALKFFRVPVPKRYRSEENAKKLMELACSMKISQKKLKKFEKEYNTIREQQ
EQQEAPIERYERENRRLQEANMRLEQENDDLAHELVSSKIALRKDLDNAEEKADALNKEL
LLTKQKLVDSEDEKRRLEEESAQLKEMCRRELDKSESEIKKNGSIIGEYKQICSQLSDRL
EKQQAANRGELEKIRAKVEGCDKCSALFNKEGRVRVAATAAPPGGGEETDEEKEGLKNQL
REMELELAQTKLQLVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTLSSIKTVTGTQGKE
TT
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaagggctcagtggggaagattagcgtgtcgtcggactctgtgtccactctc
aacagtgaggactttgtgctcgtgtcccggctgggggacgagacgccctcgtccactaat
aatggtagtgatgacgaaaagacaggattgaaggtgatttctcaggaaggggtcagcttt
aagattgtaggaaatggaagtgaacagcaactccaaaaggagctagaggacgtcctcatg
gagccgtcattggctgacgccaggccggcggcactggtgaatgctggggatctcgccctc
ccacccaccacagcatcacctgtagcaccagacactgaccccctcagtggacagccaccc
aaggtggagatggtgcttcctgttcagactgcacaggagagcgagctgaatgagcggtca
tatcgtggaggtgaatcgtcatcagacggtagccctggtagtccgataccagatgatgac
agcgtagtcttcagccagctgacgtatcttggatgcgcctcagtcaatgccccccgcagt
gagggtgaagccctccgtatgatgagcatcctcagagggcagtgtcagctcccattggat
gtcacgctctctgtgccaggcgtgtctgaaggcactgtcaggcttttggaccccaacaac
agcacagagattgccaactaccccatctataagattctgttctgtgtgcgtggccatgac
ggcacgccggagagcgactgctttgcgttcacagagagccactacaatgcagagatcttc
aggatccatgtgttccgttgccaaatccaagaggccgtgagtaggattctgtacagcttt
gcaactgcatttcggcggtcagctaagaaggcagcggtggcatgtcagcagtctgctcca
ctcacacctgatagcgacttgtttatcttcactgtcagcctagaaatcaaagaggatgac
ggcaaaggcactttcagtgctgtagcgaaagacaaggacaagcagaccttcaaactacgt
gctggaatggacaagaaaattgtcatttatatccagcagacatccaataaggaactggct
attgagcggtgtttcggtcttctgctcagccctggcaagaacgtcaagaacagtgacatg
caccttctagacctggagtcaatgggaaaaagctctgatgggaagtcttacatcatcaca
ggaagttggacccccagtacaccccagttccaggctgtgaacgaagaaacgcccaaagat
aaattcatgtacatgacaacagcagtggacctagtcattacagaagttgaggagccggtc
cgtttccttttggagacaagggtccgggtgtgctcccccaatgatcgtctcttctggccc
ttcagcaagcgcagccacactgaaaccttctacctgaaactgcgacaaatggaacgcaag
gagcggaagagtccttcttcggacacactttacgaggtggtgagtttggaaagtgagaca
gagagagcaaaacggaagaccacagcgagtccgggcatcctctccggtggggtcccttct
ccacccgaagatgacgaagaggaagacaatgatgagccgttactcagtggttctggtgat
gtttccaaagagtgtgctgagaagatcctggagacctggggagatttgttatccaagtgg
cacatgaacctgtgcgttcgccccaggcagcttccaactctggtgcggagtggcatccct
gaggcgctccggggggaggtgtggcagctactgtctggttgccacaacaatgaccaccag
gtagaggaataccgcactcttatcacaaaggaatccccgcaggacagtgccatcactcga
gacattaacaggacgttcccagctcatgactacttcaaagacactggaggagatgggcaa
gattccttgtataagatctgtaaggcatactctgtgtatgatgaggagattggctactgc
cagggacaatccttcttggctgctgtgctactgttgcacatgccagaggagcaagccttc
agtgtgctggtcaagatcatgtttgactacggcctcagggacctgttcaagcaaaacttt
gaagatcttcattgcaaatttttccagctggagagactcatgcaggaatgtattccagat
ttgtacaaccatttcctgaatgtgggtctagaagctcacatgtatgcctcccagtggttc
ctcaccctctttacagccaagttcccgctctacatggtctttcatatcatcgacctgcta
ctatgtgagggcatcagtgtgatcttcaatgtggctctggcacttctcaagacttcaaaa
gatgatctgatccaaacagactttgagggtgccctcaaattctttcgcgttccagttcct
aaaaggtatcgctctgaggaaaacgccaagaaactgatggagctggcctgtagcatgaag
atcagtcagaagaagctgaagaaatttgagaaggagtacaacaccattcgggaacagcag
gagcagcaggaggctcccatcgagagatatgagagggagaaccgtcgtttgcaggaggcc
aacatgcgcttggagcaggagaacgacgacctggcacacgagctggtcagcagcaagatt
gcgctgcgtaaagaccttgacaatgctgaggagaaggctgacgccctgaacaaggagctg
ctgctgaccaaacagaaactagtggactctgaggatgaaaagagacgactggaagaagag
tcggcacagctgaaggagatgtgcagacgagagcttgacaagtcggaatccgagattaag
aagaacggctccattatcggggaatacaagcagatctgctcccagctgagtgaccggctg
gagaaacagcaagcggccaatcggggagagcttgagaagatcagggccaaagtggaaggc
tgtgacaaatgcagcgccctttttaacaaggaaggtcgtgttcgggtggcggcgactgcg
gcaccccccggaggcggcgaagagacggatgaggagaaggagggtttgaagaaccagctg
agggagatggagctggaactggcacagaccaaactgcagctggtggaggctgagtgcaaa
atccaggacctggagcaccatcttggtttggctctcaacgaggtccaggcggccaagaag
acttggttcaaccgaacgcttagttccatcaaaacagtcacgggcacccagggcaaggag
accacctaa
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