Syngnathoides biaculeatus (alligator pipefish): 133490987
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Entry
133490987 CDS
T09681
Symbol
kcmf1
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133490987 (kcmf1)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133490987 (kcmf1)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133490987 (kcmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
TFIIA
zf-C2H2
Virul_Fac
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
133490987
NCBI-ProteinID:
XP_061657771
LinkDB
All DBs
Position
17:17603746..17616795
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AA seq
394 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRFKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVD
YDLFYGNDTFSLEQHQAFTCPYCGKMGFTETSLQEHVTAEHPETSTEVICPICAALPGGD
PNHVTDDFTAHLTLEHRAPRDLDESSSVRHVRRMFHPGRGLGGPRARRTNMHFTGGSGGA
LSSSTSSSQSSTYTPSNREAMDPIAELLSQLSGVRRAAGGQINSSGPSASQLQQLQMQLQ
LERQQAQAARQQVETGRHAARRGNNPANAAGSAAAAIPPPSAAPTSTAAPAESNPSTSSH
NSQFLLARLNESKLSEVERQLAEGERADRSLFVQELLLSTLMRDESSSSDEDERRDFADF
GAMGCVDVMPLDVALEHLQLRERASASKEPPPPL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcatgagggtgtgagctgcgatgcttgtttgaagggaaacttccggggcaga
cgcttcaagtgtctcatctgctacgactacgacctgtgcgcgtcgtgctacgagagcggc
gcaaccacgacacgacataccacggagcaccccatgcagtgtatattaaccagggtagac
tatgatttattttatggcaacgacaccttctcgctggagcagcaccaggcgttcacgtgt
ccttactgtggcaagatgggcttcacggagacgtccttgcaggaacacgtcaccgctgag
caccctgagacctccaccgaggtgatctgtccaatatgtgccgccttgcccgggggggat
cccaaccacgtcacagacgacttcacagcccacctcactctcgagcacagagcacctaga
gatttggacgagtcgagcagcgtccggcacgtgcggcggatgttccatcccgggcgggga
ctggggggcccccgagcgcgacgcaccaacatgcactttaccggcggctccgggggcgct
ctgtcttcgtccacgtcgtcatcgcagagctccacctacacgcccagcaacagggaggcc
atggaccccatcgcagagttgttgtcacagctgtccggggtgcggcgcgcagcgggcggc
caaatcaattcatcggggccttcggcgtcacagctgcagcagctccagatgcagctgcag
ctagagcggcagcaggcgcaggcggcacgccagcaggtggagacaggccgtcacgccgcc
cgacgtggcaacaacccggccaacgccgccggctcggccgccgccgccatcccgccgccc
agcgcggcccccactagcacggccgctccggccgaaagcaacccctcaacgtcatcccac
aattcccagtttctattagcacggctgaacgagtccaagttgtcggaggtggagcgccag
ctggcggagggcgaacgcgccgaccgcagcctgttcgtgcaggagctgctgctgtccacg
ctcatgcgtgacgagagttcgtcgtccgacgaggacgagcggcgggacttcgccgacttc
ggcgccatgggttgcgttgacgtgatgccccttgatgtggcgttggagcacctgcagctc
cgcgagagagcttccgcctccaaggagccgccgccgcctctttga
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